Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col15a1O35206 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col15a1O35206 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Col15a1O35206 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col15a1O35206 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC18.49■□□□□ 0.55
Col15a1O35206 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Col15a1O35206 Gm4984-201ENSMUST00000115987 360 ntBASIC18.49■□□□□ 0.55
Col15a1O35206 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Col15a1O35206 Mir6420-201ENSMUST00000185032 102 ntBASIC18.49■□□□□ 0.55
Col15a1O35206 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC18.49■□□□□ 0.55
Col15a1O35206 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC18.49■□□□□ 0.55
Col15a1O35206 AC155258.1-201ENSMUST00000219303 253 ntBASIC18.49■□□□□ 0.55
Col15a1O35206 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col15a1O35206 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Col15a1O35206 Gm38037-201ENSMUST00000192600 1624 ntBASIC18.49■□□□□ 0.55
Col15a1O35206 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col15a1O35206 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col15a1O35206 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
Col15a1O35206 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col15a1O35206 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col15a1O35206 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col15a1O35206 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col15a1O35206 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC18.48■□□□□ 0.55
Col15a1O35206 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
Col15a1O35206 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col15a1O35206 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col15a1O35206 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col15a1O35206 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Col15a1O35206 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC18.48■□□□□ 0.55
Col15a1O35206 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC18.48■□□□□ 0.55
Col15a1O35206 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC18.48■□□□□ 0.55
Col15a1O35206 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col15a1O35206 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col15a1O35206 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col15a1O35206 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC18.48■□□□□ 0.55
Col15a1O35206 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
Col15a1O35206 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Col15a1O35206 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col15a1O35206 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col15a1O35206 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Col15a1O35206 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col15a1O35206 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC18.48■□□□□ 0.55
Col15a1O35206 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Col15a1O35206 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Col15a1O35206 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Col15a1O35206 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col15a1O35206 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Col15a1O35206 Gm27839-201ENSMUST00000184242 106 ntBASIC18.47■□□□□ 0.55
Col15a1O35206 Gm37714-201ENSMUST00000194742 342 ntBASIC18.47■□□□□ 0.55
Col15a1O35206 Ighv8-14-201ENSMUST00000196781 358 ntBASIC18.47■□□□□ 0.55
Col15a1O35206 Gm5425-201ENSMUST00000214125 459 ntBASIC18.47■□□□□ 0.55
Col15a1O35206 AC110817.1-201ENSMUST00000225706 605 ntBASIC18.47■□□□□ 0.55
Col15a1O35206 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Col15a1O35206 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col15a1O35206 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col15a1O35206 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col15a1O35206 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Col15a1O35206 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col15a1O35206 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col15a1O35206 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Col15a1O35206 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col15a1O35206 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Col15a1O35206 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Col15a1O35206 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col15a1O35206 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col15a1O35206 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col15a1O35206 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col15a1O35206 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col15a1O35206 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col15a1O35206 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC18.46■□□□□ 0.55
Col15a1O35206 Mir692-1-201ENSMUST00000102263 109 ntBASIC18.46■□□□□ 0.55
Col15a1O35206 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Col15a1O35206 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Col15a1O35206 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col15a1O35206 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
Col15a1O35206 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC18.46■□□□□ 0.55
Col15a1O35206 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC18.46■□□□□ 0.55
Col15a1O35206 Gm44608-201ENSMUST00000206827 855 ntBASIC18.46■□□□□ 0.55
Col15a1O35206 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC18.46■□□□□ 0.55
Col15a1O35206 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC18.46■□□□□ 0.55
Col15a1O35206 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Col15a1O35206 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col15a1O35206 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col15a1O35206 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col15a1O35206 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col15a1O35206 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col15a1O35206 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Col15a1O35206 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC18.46■□□□□ 0.55
Col15a1O35206 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC18.46■□□□□ 0.55
Col15a1O35206 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Col15a1O35206 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
Col15a1O35206 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col15a1O35206 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col15a1O35206 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col15a1O35206 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col15a1O35206 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col15a1O35206 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col15a1O35206 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Col15a1O35206 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC18.45■□□□□ 0.54
Col15a1O35206 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms