Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cx3cl1O35188 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Cx3cl1O35188 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cx3cl1O35188 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cx3cl1O35188 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cx3cl1O35188 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cx3cl1O35188 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cx3cl1O35188 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cx3cl1O35188 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cx3cl1O35188 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cx3cl1O35188 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cx3cl1O35188 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cx3cl1O35188 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cx3cl1O35188 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cx3cl1O35188 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Cx3cl1O35188 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cx3cl1O35188 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cx3cl1O35188 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cx3cl1O35188 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cx3cl1O35188 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cx3cl1O35188 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
Cx3cl1O35188 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cx3cl1O35188 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Cx3cl1O35188 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC13.7□□□□□ -0.22
Cx3cl1O35188 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
Cx3cl1O35188 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
Cx3cl1O35188 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cx3cl1O35188 Gm18889-201ENSMUST00000174284 929 ntBASIC13.7□□□□□ -0.22
Cx3cl1O35188 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cx3cl1O35188 AC131187.1-201ENSMUST00000224567 809 ntBASIC13.7□□□□□ -0.22
Cx3cl1O35188 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC13.7□□□□□ -0.22
Cx3cl1O35188 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cx3cl1O35188 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cx3cl1O35188 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cx3cl1O35188 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Cx3cl1O35188 Gm10676-201ENSMUST00000098778 3221 ntBASIC13.7□□□□□ -0.22
Cx3cl1O35188 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
Cx3cl1O35188 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC13.7□□□□□ -0.22
Cx3cl1O35188 Nudt18-203ENSMUST00000228768 1578 ntBASIC13.7□□□□□ -0.22
Cx3cl1O35188 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cx3cl1O35188 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cx3cl1O35188 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cx3cl1O35188 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Cx3cl1O35188 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cx3cl1O35188 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Cx3cl1O35188 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cx3cl1O35188 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cx3cl1O35188 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cx3cl1O35188 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Cx3cl1O35188 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Cx3cl1O35188 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC13.69□□□□□ -0.22
Cx3cl1O35188 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cx3cl1O35188 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cx3cl1O35188 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cx3cl1O35188 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Cx3cl1O35188 Gm37728-201ENSMUST00000195025 2292 ntBASIC13.69□□□□□ -0.22
Cx3cl1O35188 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cx3cl1O35188 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cx3cl1O35188 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cx3cl1O35188 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.69□□□□□ -0.22
Cx3cl1O35188 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Cx3cl1O35188 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Cx3cl1O35188 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cx3cl1O35188 Gm13464-201ENSMUST00000119418 935 ntBASIC13.69□□□□□ -0.22
Cx3cl1O35188 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cx3cl1O35188 Gm26308-201ENSMUST00000157768 69 ntBASIC13.69□□□□□ -0.22
Cx3cl1O35188 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cx3cl1O35188 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC13.69□□□□□ -0.22
Cx3cl1O35188 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Cx3cl1O35188 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC13.69□□□□□ -0.22
Cx3cl1O35188 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cx3cl1O35188 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Cx3cl1O35188 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Cx3cl1O35188 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Cx3cl1O35188 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cx3cl1O35188 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cx3cl1O35188 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cx3cl1O35188 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cx3cl1O35188 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cx3cl1O35188 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cx3cl1O35188 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC13.68□□□□□ -0.22
Cx3cl1O35188 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Cx3cl1O35188 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Cx3cl1O35188 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cx3cl1O35188 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Cx3cl1O35188 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cx3cl1O35188 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cx3cl1O35188 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cx3cl1O35188 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cx3cl1O35188 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cx3cl1O35188 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Cx3cl1O35188 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cx3cl1O35188 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cx3cl1O35188 Gm8749-201ENSMUST00000117737 331 ntBASIC13.68□□□□□ -0.22
Cx3cl1O35188 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC13.68□□□□□ -0.22
Cx3cl1O35188 Gm18737-201ENSMUST00000173594 937 ntBASIC13.68□□□□□ -0.22
Cx3cl1O35188 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Cx3cl1O35188 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC13.68□□□□□ -0.22
Cx3cl1O35188 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cx3cl1O35188 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms