Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Gm42670-201ENSMUST00000201816 1292 ntBASIC17.34■□□□□ 0.37
Hdac1O09106 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Hdac1O09106 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hdac1O09106 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hdac1O09106 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hdac1O09106 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hdac1O09106 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hdac1O09106 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Hdac1O09106 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hdac1O09106 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hdac1O09106 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hdac1O09106 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hdac1O09106 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hdac1O09106 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Hdac1O09106 Matn2-206ENSMUST00000228570 2798 ntBASIC17.34■□□□□ 0.37
Hdac1O09106 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Hdac1O09106 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hdac1O09106 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hdac1O09106 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC17.33■□□□□ 0.37
Hdac1O09106 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hdac1O09106 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Hdac1O09106 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Hdac1O09106 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Hdac1O09106 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
Hdac1O09106 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hdac1O09106 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hdac1O09106 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hdac1O09106 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hdac1O09106 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Hdac1O09106 Gm16026-204ENSMUST00000162652 683 ntBASIC17.33■□□□□ 0.36
Hdac1O09106 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC17.33■□□□□ 0.36
Hdac1O09106 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hdac1O09106 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC17.33■□□□□ 0.36
Hdac1O09106 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hdac1O09106 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hdac1O09106 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hdac1O09106 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hdac1O09106 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Hdac1O09106 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hdac1O09106 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hdac1O09106 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hdac1O09106 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hdac1O09106 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hdac1O09106 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hdac1O09106 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC17.32■□□□□ 0.36
Hdac1O09106 Gm42872-201ENSMUST00000200026 1967 ntBASIC17.32■□□□□ 0.36
Hdac1O09106 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Hdac1O09106 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hdac1O09106 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hdac1O09106 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC17.32■□□□□ 0.36
Hdac1O09106 Gm13036-201ENSMUST00000117799 748 ntBASIC17.32■□□□□ 0.36
Hdac1O09106 Gm13597-201ENSMUST00000121239 375 ntBASIC17.32■□□□□ 0.36
Hdac1O09106 Gm37230-201ENSMUST00000194491 818 ntBASIC17.32■□□□□ 0.36
Hdac1O09106 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC17.32■□□□□ 0.36
Hdac1O09106 AC131709.1-201ENSMUST00000224731 1180 ntBASIC17.32■□□□□ 0.36
Hdac1O09106 AC102291.3-201ENSMUST00000226566 405 ntBASIC17.32■□□□□ 0.36
Hdac1O09106 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hdac1O09106 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Hdac1O09106 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hdac1O09106 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hdac1O09106 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hdac1O09106 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
Hdac1O09106 Gm6159-201ENSMUST00000191249 1724 ntBASIC17.32■□□□□ 0.36
Hdac1O09106 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hdac1O09106 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hdac1O09106 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hdac1O09106 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
Hdac1O09106 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Hdac1O09106 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hdac1O09106 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hdac1O09106 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Hdac1O09106 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC17.31■□□□□ 0.36
Hdac1O09106 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hdac1O09106 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hdac1O09106 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hdac1O09106 Gm2420-202ENSMUST00000202224 2249 ntBASIC17.31■□□□□ 0.36
Hdac1O09106 Gm30238-201ENSMUST00000195528 2603 ntBASIC17.31■□□□□ 0.36
Hdac1O09106 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hdac1O09106 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hdac1O09106 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Hdac1O09106 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC17.31■□□□□ 0.36
Hdac1O09106 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hdac1O09106 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hdac1O09106 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hdac1O09106 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hdac1O09106 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hdac1O09106 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hdac1O09106 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hdac1O09106 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hdac1O09106 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Hdac1O09106 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Hdac1O09106 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Hdac1O09106 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC17.31■□□□□ 0.36
Hdac1O09106 Ntrk2-209ENSMUST00000225950 2640 ntBASIC17.31■□□□□ 0.36
Hdac1O09106 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC17.31■□□□□ 0.36
Hdac1O09106 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hdac1O09106 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hdac1O09106 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hdac1O09106 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hdac1O09106 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms