Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Gm2423-201ENSMUST00000074863 733 ntBASIC15.15■□□□□ 0.02
Ebf3O08791 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ebf3O08791 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ebf3O08791 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ebf3O08791 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ebf3O08791 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ebf3O08791 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ebf3O08791 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ebf3O08791 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ebf3O08791 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ebf3O08791 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ebf3O08791 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ebf3O08791 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ebf3O08791 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ebf3O08791 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ebf3O08791 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Ebf3O08791 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ebf3O08791 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ebf3O08791 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ebf3O08791 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC15.14■□□□□ 0.01
Ebf3O08791 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ebf3O08791 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ebf3O08791 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC15.14■□□□□ 0.01
Ebf3O08791 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC15.14■□□□□ 0.01
Ebf3O08791 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC15.14■□□□□ 0.01
Ebf3O08791 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ebf3O08791 Gm25144-201ENSMUST00000179561 110 ntBASIC15.14■□□□□ 0.01
Ebf3O08791 Gm25352-201ENSMUST00000179815 110 ntBASIC15.14■□□□□ 0.01
Ebf3O08791 Mir7684-201ENSMUST00000183858 60 ntBASIC15.14■□□□□ 0.01
Ebf3O08791 Gm28630-201ENSMUST00000187806 498 ntBASIC15.14■□□□□ 0.01
Ebf3O08791 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ebf3O08791 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC15.14■□□□□ 0.01
Ebf3O08791 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Ebf3O08791 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Ebf3O08791 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ebf3O08791 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ebf3O08791 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC15.14■□□□□ 0.01
Ebf3O08791 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ebf3O08791 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ebf3O08791 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ebf3O08791 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC15.14■□□□□ 0.01
Ebf3O08791 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ebf3O08791 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC15.14■□□□□ 0.01
Ebf3O08791 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ebf3O08791 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC15.13■□□□□ 0.01
Ebf3O08791 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ebf3O08791 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ebf3O08791 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ebf3O08791 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Ebf3O08791 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ebf3O08791 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Ebf3O08791 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ebf3O08791 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ebf3O08791 Gm11424-201ENSMUST00000121929 829 ntBASIC15.13■□□□□ 0.01
Ebf3O08791 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ebf3O08791 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Ebf3O08791 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ebf3O08791 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Ebf3O08791 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ebf3O08791 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ebf3O08791 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ebf3O08791 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ebf3O08791 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ebf3O08791 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ebf3O08791 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ebf3O08791 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ebf3O08791 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Ebf3O08791 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ebf3O08791 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ebf3O08791 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Ebf3O08791 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ebf3O08791 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC15.13■□□□□ 0.01
Ebf3O08791 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ebf3O08791 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ebf3O08791 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ebf3O08791 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ebf3O08791 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC15.12■□□□□ 0.01
Ebf3O08791 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Ebf3O08791 Gm10605-202ENSMUST00000183019 3198 ntBASIC15.12■□□□□ 0.01
Ebf3O08791 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ebf3O08791 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ebf3O08791 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ebf3O08791 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ebf3O08791 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Ebf3O08791 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ebf3O08791 AC124751.1-201ENSMUST00000222716 1408 ntBASIC15.12■□□□□ 0.01
Ebf3O08791 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ebf3O08791 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Ebf3O08791 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
Ebf3O08791 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
Ebf3O08791 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC15.12■□□□□ 0.01
Ebf3O08791 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Ebf3O08791 AC140375.2-201ENSMUST00000225283 584 ntBASIC15.12■□□□□ 0.01
Ebf3O08791 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ebf3O08791 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC15.12■□□□□ 0.01
Ebf3O08791 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ebf3O08791 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Ebf3O08791 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC15.12■□□□□ 0.01
Ebf3O08791 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ebf3O08791 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms