Protein–RNA interactions for Protein: O08604

Raet1c, Retinoic acid early-inducible protein 1-gamma, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1cO08604 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Raet1cO08604 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Raet1cO08604 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Raet1cO08604 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Raet1cO08604 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Raet1cO08604 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Raet1cO08604 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
Raet1cO08604 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Raet1cO08604 Gm9856-201ENSMUST00000217077 2578 ntBASIC13.02□□□□□ -0.32
Raet1cO08604 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Raet1cO08604 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Raet1cO08604 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Raet1cO08604 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Raet1cO08604 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Raet1cO08604 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC13.02□□□□□ -0.33
Raet1cO08604 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Raet1cO08604 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC13.02□□□□□ -0.33
Raet1cO08604 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC13.02□□□□□ -0.33
Raet1cO08604 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC13.02□□□□□ -0.33
Raet1cO08604 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Raet1cO08604 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Raet1cO08604 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Raet1cO08604 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Raet1cO08604 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Raet1cO08604 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Raet1cO08604 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13.02□□□□□ -0.33
Raet1cO08604 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Raet1cO08604 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Raet1cO08604 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Raet1cO08604 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Raet1cO08604 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Raet1cO08604 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Raet1cO08604 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.02□□□□□ -0.33
Raet1cO08604 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC13.02□□□□□ -0.33
Raet1cO08604 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13.01□□□□□ -0.33
Raet1cO08604 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Raet1cO08604 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Raet1cO08604 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Raet1cO08604 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Raet1cO08604 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Raet1cO08604 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Raet1cO08604 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Raet1cO08604 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Raet1cO08604 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Raet1cO08604 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Raet1cO08604 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Raet1cO08604 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Raet1cO08604 Mir8117-201ENSMUST00000184773 107 ntBASIC13.01□□□□□ -0.33
Raet1cO08604 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Raet1cO08604 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Raet1cO08604 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Raet1cO08604 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Raet1cO08604 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Raet1cO08604 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Raet1cO08604 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Raet1cO08604 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Raet1cO08604 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Raet1cO08604 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Raet1cO08604 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Raet1cO08604 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Raet1cO08604 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Raet1cO08604 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC13.01□□□□□ -0.33
Raet1cO08604 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Raet1cO08604 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Raet1cO08604 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Raet1cO08604 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Raet1cO08604 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Raet1cO08604 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Raet1cO08604 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC13□□□□□ -0.33
Raet1cO08604 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Raet1cO08604 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Raet1cO08604 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13□□□□□ -0.33
Raet1cO08604 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Raet1cO08604 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Raet1cO08604 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Raet1cO08604 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Raet1cO08604 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13□□□□□ -0.33
Raet1cO08604 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Raet1cO08604 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC13□□□□□ -0.33
Raet1cO08604 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13□□□□□ -0.33
Raet1cO08604 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Raet1cO08604 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC13□□□□□ -0.33
Raet1cO08604 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Raet1cO08604 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Raet1cO08604 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Raet1cO08604 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Raet1cO08604 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC13□□□□□ -0.33
Raet1cO08604 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
Raet1cO08604 Gm12892-201ENSMUST00000117367 1146 ntBASIC13□□□□□ -0.33
Raet1cO08604 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Raet1cO08604 Mir3113-201ENSMUST00000175478 76 ntBASIC13□□□□□ -0.33
Raet1cO08604 Gm4691-201ENSMUST00000182339 1000 ntBASIC13□□□□□ -0.33
Raet1cO08604 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC13□□□□□ -0.33
Raet1cO08604 Gm2451-201ENSMUST00000199447 999 ntBASIC13□□□□□ -0.33
Raet1cO08604 Gm10290-201ENSMUST00000200451 999 ntBASIC13□□□□□ -0.33
Raet1cO08604 AW822252-206ENSMUST00000208904 237 ntBASIC13□□□□□ -0.33
Raet1cO08604 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Raet1cO08604 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Raet1cO08604 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Raet1cO08604 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms