Protein–RNA interactions for Protein: O08602

Raet1a, Retinoic acid early-inducible protein 1-alpha, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1aO08602 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Raet1aO08602 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC12.93□□□□□ -0.34
Raet1aO08602 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Raet1aO08602 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC12.93□□□□□ -0.34
Raet1aO08602 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Raet1aO08602 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Raet1aO08602 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Raet1aO08602 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Raet1aO08602 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Raet1aO08602 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Raet1aO08602 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Raet1aO08602 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Raet1aO08602 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Raet1aO08602 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Raet1aO08602 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Raet1aO08602 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Raet1aO08602 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC12.93□□□□□ -0.34
Raet1aO08602 Gm15467-201ENSMUST00000120582 445 ntBASIC12.93□□□□□ -0.34
Raet1aO08602 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Raet1aO08602 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Raet1aO08602 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Raet1aO08602 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Raet1aO08602 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Raet1aO08602 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Raet1aO08602 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Raet1aO08602 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC12.92□□□□□ -0.34
Raet1aO08602 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Raet1aO08602 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Raet1aO08602 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC12.92□□□□□ -0.34
Raet1aO08602 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Raet1aO08602 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC12.92□□□□□ -0.34
Raet1aO08602 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Raet1aO08602 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Raet1aO08602 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Raet1aO08602 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Raet1aO08602 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Raet1aO08602 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC12.92□□□□□ -0.34
Raet1aO08602 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Raet1aO08602 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC12.92□□□□□ -0.34
Raet1aO08602 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Raet1aO08602 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Raet1aO08602 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC12.92□□□□□ -0.34
Raet1aO08602 Gm6226-201ENSMUST00000117765 1146 ntBASIC12.92□□□□□ -0.34
Raet1aO08602 Gm14494-201ENSMUST00000118786 435 ntBASIC12.92□□□□□ -0.34
Raet1aO08602 Gm17271-201ENSMUST00000165535 355 ntBASIC12.92□□□□□ -0.34
Raet1aO08602 Rpph1-201ENSMUST00000175096 319 ntBASIC12.92□□□□□ -0.34
Raet1aO08602 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Raet1aO08602 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC12.92□□□□□ -0.34
Raet1aO08602 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Raet1aO08602 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Raet1aO08602 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Raet1aO08602 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Raet1aO08602 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Raet1aO08602 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Raet1aO08602 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Raet1aO08602 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
Raet1aO08602 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Raet1aO08602 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Raet1aO08602 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Raet1aO08602 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Raet1aO08602 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Raet1aO08602 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Raet1aO08602 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Raet1aO08602 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Raet1aO08602 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC12.91□□□□□ -0.34
Raet1aO08602 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Raet1aO08602 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Raet1aO08602 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Raet1aO08602 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Raet1aO08602 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Raet1aO08602 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Raet1aO08602 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC12.91□□□□□ -0.34
Raet1aO08602 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC12.91□□□□□ -0.34
Raet1aO08602 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Raet1aO08602 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC12.91□□□□□ -0.34
Raet1aO08602 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC12.91□□□□□ -0.34
Raet1aO08602 Gm15483-201ENSMUST00000120338 456 ntBASIC12.91□□□□□ -0.34
Raet1aO08602 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Raet1aO08602 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Raet1aO08602 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC12.91□□□□□ -0.34
Raet1aO08602 Gm27525-201ENSMUST00000184465 107 ntBASIC12.91□□□□□ -0.34
Raet1aO08602 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC12.91□□□□□ -0.34
Raet1aO08602 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Raet1aO08602 Gm6443-201ENSMUST00000203599 874 ntBASIC12.91□□□□□ -0.34
Raet1aO08602 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Raet1aO08602 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Raet1aO08602 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Raet1aO08602 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Raet1aO08602 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Raet1aO08602 AC126250.1-201ENSMUST00000228343 1768 ntBASIC12.91□□□□□ -0.34
Raet1aO08602 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Raet1aO08602 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Raet1aO08602 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Raet1aO08602 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Raet1aO08602 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Raet1aO08602 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC12.91□□□□□ -0.34
Raet1aO08602 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC12.91□□□□□ -0.34
Raet1aO08602 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Raet1aO08602 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Raet1aO08602 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms