Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC15.01□□□□□ -0.01
Trim55G3X8Y1 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim55G3X8Y1 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trim55G3X8Y1 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim55G3X8Y1 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim55G3X8Y1 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim55G3X8Y1 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trim55G3X8Y1 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim55G3X8Y1 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Trim55G3X8Y1 Ntrk2-204ENSMUST00000224259 3049 ntBASIC15.01□□□□□ -0.01
Trim55G3X8Y1 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trim55G3X8Y1 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim55G3X8Y1 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Trim55G3X8Y1 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim55G3X8Y1 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Trim55G3X8Y1 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim55G3X8Y1 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim55G3X8Y1 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim55G3X8Y1 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim55G3X8Y1 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Trim55G3X8Y1 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trim55G3X8Y1 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trim55G3X8Y1 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
Trim55G3X8Y1 Gm11539-201ENSMUST00000119837 557 ntBASIC15□□□□□ -0.01
Trim55G3X8Y1 Gm13559-201ENSMUST00000120476 863 ntBASIC15□□□□□ -0.01
Trim55G3X8Y1 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
Trim55G3X8Y1 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC15□□□□□ -0.01
Trim55G3X8Y1 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trim55G3X8Y1 Gm3375-201ENSMUST00000203929 796 ntBASIC15□□□□□ -0.01
Trim55G3X8Y1 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC15□□□□□ -0.01
Trim55G3X8Y1 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC15□□□□□ -0.01
Trim55G3X8Y1 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC15□□□□□ -0.01
Trim55G3X8Y1 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC15□□□□□ -0.01
Trim55G3X8Y1 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim55G3X8Y1 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim55G3X8Y1 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC15□□□□□ -0.01
Trim55G3X8Y1 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trim55G3X8Y1 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim55G3X8Y1 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim55G3X8Y1 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim55G3X8Y1 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim55G3X8Y1 Gm43195-201ENSMUST00000200614 2332 ntBASIC15□□□□□ -0.01
Trim55G3X8Y1 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC15□□□□□ -0.01
Trim55G3X8Y1 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
Trim55G3X8Y1 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trim55G3X8Y1 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim55G3X8Y1 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trim55G3X8Y1 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim55G3X8Y1 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
Trim55G3X8Y1 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trim55G3X8Y1 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
Trim55G3X8Y1 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Trim55G3X8Y1 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim55G3X8Y1 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim55G3X8Y1 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trim55G3X8Y1 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Trim55G3X8Y1 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim55G3X8Y1 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim55G3X8Y1 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim55G3X8Y1 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trim55G3X8Y1 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Trim55G3X8Y1 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trim55G3X8Y1 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trim55G3X8Y1 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim55G3X8Y1 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trim55G3X8Y1 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim55G3X8Y1 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim55G3X8Y1 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC14.99□□□□□ -0.01
Trim55G3X8Y1 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim55G3X8Y1 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim55G3X8Y1 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Trim55G3X8Y1 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim55G3X8Y1 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trim55G3X8Y1 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim55G3X8Y1 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim55G3X8Y1 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim55G3X8Y1 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim55G3X8Y1 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim55G3X8Y1 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Trim55G3X8Y1 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim55G3X8Y1 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim55G3X8Y1 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim55G3X8Y1 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim55G3X8Y1 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Trim55G3X8Y1 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim55G3X8Y1 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim55G3X8Y1 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Trim55G3X8Y1 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim55G3X8Y1 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trim55G3X8Y1 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trim55G3X8Y1 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim55G3X8Y1 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trim55G3X8Y1 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Trim55G3X8Y1 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trim55G3X8Y1 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC14.98□□□□□ -0.01
Trim55G3X8Y1 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC14.98□□□□□ -0.01
Trim55G3X8Y1 Gm13436-201ENSMUST00000120418 567 ntBASIC14.98□□□□□ -0.01
Trim55G3X8Y1 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim55G3X8Y1 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim55G3X8Y1 Otx2os1-204ENSMUST00000227221 751 ntBASIC14.98□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms