Protein–RNA interactions for Protein: B2RUQ2

Usf3, Gene model 608, (NCBI), mousemouse

Predictions only

Length 2,221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf3B2RUQ2 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usf3B2RUQ2 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Usf3B2RUQ2 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC12.18□□□□□ -0.46
Usf3B2RUQ2 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Usf3B2RUQ2 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Usf3B2RUQ2 AC126408.1-201ENSMUST00000225184 523 ntBASIC12.18□□□□□ -0.46
Usf3B2RUQ2 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Usf3B2RUQ2 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usf3B2RUQ2 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usf3B2RUQ2 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
Usf3B2RUQ2 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usf3B2RUQ2 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Usf3B2RUQ2 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usf3B2RUQ2 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usf3B2RUQ2 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usf3B2RUQ2 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usf3B2RUQ2 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usf3B2RUQ2 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usf3B2RUQ2 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Usf3B2RUQ2 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usf3B2RUQ2 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC12.17□□□□□ -0.46
Usf3B2RUQ2 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usf3B2RUQ2 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC12.17□□□□□ -0.46
Usf3B2RUQ2 Gm7336-201ENSMUST00000107041 1232 ntBASIC12.17□□□□□ -0.46
Usf3B2RUQ2 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Usf3B2RUQ2 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Usf3B2RUQ2 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC12.17□□□□□ -0.46
Usf3B2RUQ2 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC12.17□□□□□ -0.46
Usf3B2RUQ2 Gm18889-201ENSMUST00000174284 929 ntBASIC12.17□□□□□ -0.46
Usf3B2RUQ2 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usf3B2RUQ2 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usf3B2RUQ2 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC12.17□□□□□ -0.46
Usf3B2RUQ2 Gm10154-201ENSMUST00000084445 354 ntBASIC12.17□□□□□ -0.46
Usf3B2RUQ2 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Usf3B2RUQ2 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usf3B2RUQ2 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Usf3B2RUQ2 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usf3B2RUQ2 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usf3B2RUQ2 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Usf3B2RUQ2 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usf3B2RUQ2 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Usf3B2RUQ2 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Usf3B2RUQ2 Celf4-206ENSMUST00000224553 1729 ntBASIC12.17□□□□□ -0.46
Usf3B2RUQ2 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usf3B2RUQ2 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC12.17□□□□□ -0.46
Usf3B2RUQ2 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usf3B2RUQ2 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usf3B2RUQ2 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usf3B2RUQ2 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Usf3B2RUQ2 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usf3B2RUQ2 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC12.17□□□□□ -0.46
Usf3B2RUQ2 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Usf3B2RUQ2 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC12.17□□□□□ -0.46
Usf3B2RUQ2 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC12.17□□□□□ -0.46
Usf3B2RUQ2 Gm25948-201ENSMUST00000175334 112 ntBASIC12.17□□□□□ -0.46
Usf3B2RUQ2 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Usf3B2RUQ2 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usf3B2RUQ2 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usf3B2RUQ2 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usf3B2RUQ2 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usf3B2RUQ2 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Usf3B2RUQ2 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usf3B2RUQ2 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usf3B2RUQ2 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Usf3B2RUQ2 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usf3B2RUQ2 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usf3B2RUQ2 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usf3B2RUQ2 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usf3B2RUQ2 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Usf3B2RUQ2 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usf3B2RUQ2 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usf3B2RUQ2 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Usf3B2RUQ2 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC12.16□□□□□ -0.46
Usf3B2RUQ2 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Usf3B2RUQ2 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC12.16□□□□□ -0.46
Usf3B2RUQ2 Sorbs3-204ENSMUST00000227929 2460 ntBASIC12.16□□□□□ -0.46
Usf3B2RUQ2 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usf3B2RUQ2 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usf3B2RUQ2 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Usf3B2RUQ2 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Usf3B2RUQ2 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usf3B2RUQ2 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usf3B2RUQ2 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usf3B2RUQ2 Gm43509-201ENSMUST00000196551 2594 ntBASIC12.16□□□□□ -0.46
Usf3B2RUQ2 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usf3B2RUQ2 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usf3B2RUQ2 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC12.16□□□□□ -0.46
Usf3B2RUQ2 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC12.16□□□□□ -0.46
Usf3B2RUQ2 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Usf3B2RUQ2 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usf3B2RUQ2 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usf3B2RUQ2 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Usf3B2RUQ2 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usf3B2RUQ2 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usf3B2RUQ2 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Usf3B2RUQ2 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usf3B2RUQ2 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usf3B2RUQ2 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC12.16□□□□□ -0.46
Usf3B2RUQ2 Gm11960-202ENSMUST00000181063 2858 ntBASIC12.16□□□□□ -0.46
Usf3B2RUQ2 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms