Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc112A0AUP1 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc112A0AUP1 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC16.66■□□□□ 0.26
Ccdc112A0AUP1 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc112A0AUP1 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC16.66■□□□□ 0.26
Ccdc112A0AUP1 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC16.66■□□□□ 0.26
Ccdc112A0AUP1 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc112A0AUP1 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc112A0AUP1 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc112A0AUP1 Gm4691-201ENSMUST00000182339 1000 ntBASIC16.66■□□□□ 0.26
Ccdc112A0AUP1 Gm27628-201ENSMUST00000184911 107 ntBASIC16.66■□□□□ 0.26
Ccdc112A0AUP1 Gm2451-201ENSMUST00000199447 999 ntBASIC16.66■□□□□ 0.26
Ccdc112A0AUP1 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc112A0AUP1 Gm10290-201ENSMUST00000200451 999 ntBASIC16.66■□□□□ 0.26
Ccdc112A0AUP1 Olfr286-202ENSMUST00000205305 969 ntBASIC16.66■□□□□ 0.26
Ccdc112A0AUP1 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC16.66■□□□□ 0.26
Ccdc112A0AUP1 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc112A0AUP1 Gm15590-201ENSMUST00000078419 552 ntBASIC16.66■□□□□ 0.26
Ccdc112A0AUP1 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc112A0AUP1 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Ccdc112A0AUP1 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc112A0AUP1 Gm44291-201ENSMUST00000203102 2865 ntBASIC16.66■□□□□ 0.26
Ccdc112A0AUP1 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc112A0AUP1 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc112A0AUP1 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc112A0AUP1 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC16.66■□□□□ 0.26
Ccdc112A0AUP1 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc112A0AUP1 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC16.65■□□□□ 0.26
Ccdc112A0AUP1 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc112A0AUP1 Gm43399-201ENSMUST00000202546 2374 ntBASIC16.65■□□□□ 0.26
Ccdc112A0AUP1 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc112A0AUP1 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc112A0AUP1 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc112A0AUP1 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
Ccdc112A0AUP1 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Ccdc112A0AUP1 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc112A0AUP1 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC16.65■□□□□ 0.26
Ccdc112A0AUP1 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc112A0AUP1 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Ccdc112A0AUP1 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC16.65■□□□□ 0.26
Ccdc112A0AUP1 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC16.65■□□□□ 0.26
Ccdc112A0AUP1 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc112A0AUP1 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc112A0AUP1 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Ccdc112A0AUP1 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc112A0AUP1 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc112A0AUP1 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC16.65■□□□□ 0.26
Ccdc112A0AUP1 Gm11873-201ENSMUST00000117877 1304 ntBASIC16.65■□□□□ 0.26
Ccdc112A0AUP1 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc112A0AUP1 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC16.65■□□□□ 0.26
Ccdc112A0AUP1 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Ccdc112A0AUP1 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc112A0AUP1 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Ccdc112A0AUP1 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc112A0AUP1 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Ccdc112A0AUP1 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc112A0AUP1 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc112A0AUP1 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc112A0AUP1 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
Ccdc112A0AUP1 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc112A0AUP1 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc112A0AUP1 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Ccdc112A0AUP1 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC16.64■□□□□ 0.25
Ccdc112A0AUP1 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc112A0AUP1 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc112A0AUP1 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc112A0AUP1 Gm13884-201ENSMUST00000118103 829 ntBASIC16.64■□□□□ 0.25
Ccdc112A0AUP1 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC16.64■□□□□ 0.25
Ccdc112A0AUP1 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC16.64■□□□□ 0.25
Ccdc112A0AUP1 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc112A0AUP1 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc112A0AUP1 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC16.64■□□□□ 0.25
Ccdc112A0AUP1 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc112A0AUP1 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC16.64■□□□□ 0.25
Ccdc112A0AUP1 AC084391.1-201ENSMUST00000200651 141 ntBASIC16.64■□□□□ 0.25
Ccdc112A0AUP1 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc112A0AUP1 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc112A0AUP1 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc112A0AUP1 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc112A0AUP1 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC16.64■□□□□ 0.25
Ccdc112A0AUP1 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc112A0AUP1 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc112A0AUP1 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Ccdc112A0AUP1 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Ccdc112A0AUP1 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc112A0AUP1 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Ccdc112A0AUP1 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC16.63■□□□□ 0.25
Ccdc112A0AUP1 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc112A0AUP1 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc112A0AUP1 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc112A0AUP1 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc112A0AUP1 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc112A0AUP1 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc112A0AUP1 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc112A0AUP1 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc112A0AUP1 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Ccdc112A0AUP1 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Ccdc112A0AUP1 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc112A0AUP1 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc112A0AUP1 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms