Protein–RNA interactions for Protein: A0A504

Smim17, MCG116182, isoform CRA_b, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim17A0A504 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smim17A0A504 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smim17A0A504 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smim17A0A504 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.22□□□□□ -0.29
Smim17A0A504 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Smim17A0A504 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Smim17A0A504 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smim17A0A504 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smim17A0A504 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smim17A0A504 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smim17A0A504 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smim17A0A504 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smim17A0A504 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smim17A0A504 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Smim17A0A504 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.21□□□□□ -0.29
Smim17A0A504 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smim17A0A504 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Smim17A0A504 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Smim17A0A504 CT009510.1-201ENSMUST00000227972 270 ntBASIC13.21□□□□□ -0.29
Smim17A0A504 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smim17A0A504 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Smim17A0A504 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smim17A0A504 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Smim17A0A504 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smim17A0A504 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smim17A0A504 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.21□□□□□ -0.29
Smim17A0A504 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Smim17A0A504 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smim17A0A504 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Smim17A0A504 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Smim17A0A504 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Smim17A0A504 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Smim17A0A504 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Smim17A0A504 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Smim17A0A504 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Smim17A0A504 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Smim17A0A504 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC13.21□□□□□ -0.3
Smim17A0A504 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Smim17A0A504 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Smim17A0A504 AC121801.1-201ENSMUST00000225363 1899 ntBASIC13.21□□□□□ -0.3
Smim17A0A504 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Smim17A0A504 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
Smim17A0A504 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Smim17A0A504 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smim17A0A504 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.2□□□□□ -0.3
Smim17A0A504 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smim17A0A504 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.2□□□□□ -0.3
Smim17A0A504 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smim17A0A504 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.2□□□□□ -0.3
Smim17A0A504 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Smim17A0A504 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Smim17A0A504 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smim17A0A504 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smim17A0A504 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smim17A0A504 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smim17A0A504 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smim17A0A504 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smim17A0A504 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smim17A0A504 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC13.2□□□□□ -0.3
Smim17A0A504 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Smim17A0A504 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC13.2□□□□□ -0.3
Smim17A0A504 AC159205.6-201ENSMUST00000224935 887 ntBASIC13.2□□□□□ -0.3
Smim17A0A504 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smim17A0A504 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smim17A0A504 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smim17A0A504 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Smim17A0A504 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Smim17A0A504 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Smim17A0A504 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smim17A0A504 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Smim17A0A504 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smim17A0A504 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
Smim17A0A504 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.2□□□□□ -0.3
Smim17A0A504 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smim17A0A504 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Smim17A0A504 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Smim17A0A504 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Smim17A0A504 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smim17A0A504 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Smim17A0A504 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
Smim17A0A504 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Smim17A0A504 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Smim17A0A504 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smim17A0A504 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Smim17A0A504 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smim17A0A504 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.19□□□□□ -0.3
Smim17A0A504 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smim17A0A504 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smim17A0A504 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smim17A0A504 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Smim17A0A504 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smim17A0A504 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smim17A0A504 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Smim17A0A504 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smim17A0A504 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC13.19□□□□□ -0.3
Smim17A0A504 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Smim17A0A504 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smim17A0A504 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC13.19□□□□□ -0.3
Smim17A0A504 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smim17A0A504 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms