Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Trav13d-4A0A0G2JFX3 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav13d-4A0A0G2JFX3 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav13d-4A0A0G2JFX3 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC10.05□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC10.05□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav13d-4A0A0G2JFX3 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Gm11780-201ENSMUST00000136880 516 ntBASIC10.05□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC10.05□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav13d-4A0A0G2JFX3 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC10.05□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC10.05□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trav13d-4A0A0G2JFX3 AC167013.2-201ENSMUST00000228520 2684 ntBASIC10.05□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav13d-4A0A0G2JFX3 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav13d-4A0A0G2JFX3 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC10.04□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC10.04□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC10.04□□□□□ -0.8
Trav13d-4A0A0G2JFX3 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms