Protein–RNA interactions for Protein: A0A075B699

Trav9d-1, T cell receptor alpha variable 9D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-1A0A075B699 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav9d-1A0A075B699 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav9d-1A0A075B699 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Trav9d-1A0A075B699 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC11.27□□□□□ -0.61
Trav9d-1A0A075B699 AC025913.2-201ENSMUST00000220136 1766 ntBASIC11.27□□□□□ -0.61
Trav9d-1A0A075B699 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Trav9d-1A0A075B699 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC11.27□□□□□ -0.61
Trav9d-1A0A075B699 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav9d-1A0A075B699 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav9d-1A0A075B699 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav9d-1A0A075B699 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav9d-1A0A075B699 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav9d-1A0A075B699 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Trav9d-1A0A075B699 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Trav9d-1A0A075B699 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav9d-1A0A075B699 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav9d-1A0A075B699 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav9d-1A0A075B699 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav9d-1A0A075B699 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav9d-1A0A075B699 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC11.27□□□□□ -0.61
Trav9d-1A0A075B699 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav9d-1A0A075B699 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav9d-1A0A075B699 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav9d-1A0A075B699 Gm44645-201ENSMUST00000205492 1653 ntBASIC11.27□□□□□ -0.61
Trav9d-1A0A075B699 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav9d-1A0A075B699 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav9d-1A0A075B699 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Trav9d-1A0A075B699 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
Trav9d-1A0A075B699 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav9d-1A0A075B699 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav9d-1A0A075B699 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav9d-1A0A075B699 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Trav9d-1A0A075B699 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav9d-1A0A075B699 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav9d-1A0A075B699 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav9d-1A0A075B699 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav9d-1A0A075B699 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav9d-1A0A075B699 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav9d-1A0A075B699 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav9d-1A0A075B699 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav9d-1A0A075B699 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav9d-1A0A075B699 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
Trav9d-1A0A075B699 Gm11764-201ENSMUST00000120221 623 ntBASIC11.26□□□□□ -0.61
Trav9d-1A0A075B699 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC11.26□□□□□ -0.61
Trav9d-1A0A075B699 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav9d-1A0A075B699 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC11.26□□□□□ -0.61
Trav9d-1A0A075B699 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Trav9d-1A0A075B699 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC11.26□□□□□ -0.61
Trav9d-1A0A075B699 Gm5864-201ENSMUST00000202263 970 ntBASIC11.26□□□□□ -0.61
Trav9d-1A0A075B699 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav9d-1A0A075B699 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Trav9d-1A0A075B699 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC11.26□□□□□ -0.61
Trav9d-1A0A075B699 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav9d-1A0A075B699 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav9d-1A0A075B699 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Trav9d-1A0A075B699 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC11.26□□□□□ -0.61
Trav9d-1A0A075B699 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav9d-1A0A075B699 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav9d-1A0A075B699 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav9d-1A0A075B699 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav9d-1A0A075B699 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav9d-1A0A075B699 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav9d-1A0A075B699 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav9d-1A0A075B699 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav9d-1A0A075B699 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav9d-1A0A075B699 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Trav9d-1A0A075B699 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Trav9d-1A0A075B699 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav9d-1A0A075B699 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav9d-1A0A075B699 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC11.25□□□□□ -0.61
Trav9d-1A0A075B699 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav9d-1A0A075B699 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC11.25□□□□□ -0.61
Trav9d-1A0A075B699 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC11.25□□□□□ -0.61
Trav9d-1A0A075B699 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav9d-1A0A075B699 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav9d-1A0A075B699 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC11.25□□□□□ -0.61
Trav9d-1A0A075B699 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav9d-1A0A075B699 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Trav9d-1A0A075B699 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav9d-1A0A075B699 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav9d-1A0A075B699 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav9d-1A0A075B699 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav9d-1A0A075B699 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav9d-1A0A075B699 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav9d-1A0A075B699 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Trav9d-1A0A075B699 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav9d-1A0A075B699 Gm6184-201ENSMUST00000120403 1261 ntBASIC11.25□□□□□ -0.61
Trav9d-1A0A075B699 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav9d-1A0A075B699 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav9d-1A0A075B699 Gm10060-201ENSMUST00000212002 111 ntBASIC11.25□□□□□ -0.61
Trav9d-1A0A075B699 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav9d-1A0A075B699 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav9d-1A0A075B699 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav9d-1A0A075B699 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav9d-1A0A075B699 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav9d-1A0A075B699 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav9d-1A0A075B699 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav9d-1A0A075B699 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav9d-1A0A075B699 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Trav9d-1A0A075B699 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 10.3 ms