Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav16d-dv11A0A075B617 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Trav16d-dv11A0A075B617 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav16d-dv11A0A075B617 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav16d-dv11A0A075B617 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav16d-dv11A0A075B617 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav16d-dv11A0A075B617 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC10.73□□□□□ -0.69
Trav16d-dv11A0A075B617 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Trav16d-dv11A0A075B617 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav16d-dv11A0A075B617 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav16d-dv11A0A075B617 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav16d-dv11A0A075B617 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
Trav16d-dv11A0A075B617 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav16d-dv11A0A075B617 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav16d-dv11A0A075B617 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav16d-dv11A0A075B617 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav16d-dv11A0A075B617 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav16d-dv11A0A075B617 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav16d-dv11A0A075B617 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC10.73□□□□□ -0.69
Trav16d-dv11A0A075B617 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Trav16d-dv11A0A075B617 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC10.73□□□□□ -0.69
Trav16d-dv11A0A075B617 Gm42928-201ENSMUST00000197338 3339 ntBASIC10.73□□□□□ -0.69
Trav16d-dv11A0A075B617 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC10.73□□□□□ -0.69
Trav16d-dv11A0A075B617 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav16d-dv11A0A075B617 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav16d-dv11A0A075B617 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav16d-dv11A0A075B617 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC10.72□□□□□ -0.69
Trav16d-dv11A0A075B617 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav16d-dv11A0A075B617 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav16d-dv11A0A075B617 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC10.72□□□□□ -0.69
Trav16d-dv11A0A075B617 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav16d-dv11A0A075B617 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav16d-dv11A0A075B617 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav16d-dv11A0A075B617 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav16d-dv11A0A075B617 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC10.72□□□□□ -0.69
Trav16d-dv11A0A075B617 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav16d-dv11A0A075B617 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Trav16d-dv11A0A075B617 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav16d-dv11A0A075B617 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav16d-dv11A0A075B617 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav16d-dv11A0A075B617 Gm13559-201ENSMUST00000120476 863 ntBASIC10.72□□□□□ -0.69
Trav16d-dv11A0A075B617 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav16d-dv11A0A075B617 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav16d-dv11A0A075B617 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC10.72□□□□□ -0.69
Trav16d-dv11A0A075B617 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav16d-dv11A0A075B617 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC10.72□□□□□ -0.69
Trav16d-dv11A0A075B617 Gm43767-201ENSMUST00000198933 381 ntBASIC10.72□□□□□ -0.69
Trav16d-dv11A0A075B617 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC10.72□□□□□ -0.69
Trav16d-dv11A0A075B617 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav16d-dv11A0A075B617 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav16d-dv11A0A075B617 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav16d-dv11A0A075B617 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC10.72□□□□□ -0.69
Trav16d-dv11A0A075B617 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC10.72□□□□□ -0.69
Trav16d-dv11A0A075B617 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav16d-dv11A0A075B617 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Trav16d-dv11A0A075B617 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav16d-dv11A0A075B617 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
Trav16d-dv11A0A075B617 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav16d-dv11A0A075B617 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav16d-dv11A0A075B617 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav16d-dv11A0A075B617 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav16d-dv11A0A075B617 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC10.72□□□□□ -0.69
Trav16d-dv11A0A075B617 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav16d-dv11A0A075B617 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav16d-dv11A0A075B617 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav16d-dv11A0A075B617 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav16d-dv11A0A075B617 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav16d-dv11A0A075B617 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav16d-dv11A0A075B617 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Trav16d-dv11A0A075B617 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trav16d-dv11A0A075B617 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav16d-dv11A0A075B617 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trav16d-dv11A0A075B617 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav16d-dv11A0A075B617 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC10.71□□□□□ -0.69
Trav16d-dv11A0A075B617 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav16d-dv11A0A075B617 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav16d-dv11A0A075B617 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC10.71□□□□□ -0.69
Trav16d-dv11A0A075B617 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav16d-dv11A0A075B617 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC10.71□□□□□ -0.69
Trav16d-dv11A0A075B617 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav16d-dv11A0A075B617 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC10.71□□□□□ -0.69
Trav16d-dv11A0A075B617 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav16d-dv11A0A075B617 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav16d-dv11A0A075B617 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav16d-dv11A0A075B617 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav16d-dv11A0A075B617 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav16d-dv11A0A075B617 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav16d-dv11A0A075B617 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Trav16d-dv11A0A075B617 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav16d-dv11A0A075B617 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC10.71□□□□□ -0.7
Trav16d-dv11A0A075B617 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Trav16d-dv11A0A075B617 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Trav16d-dv11A0A075B617 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Trav16d-dv11A0A075B617 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Trav16d-dv11A0A075B617 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC10.71□□□□□ -0.7
Trav16d-dv11A0A075B617 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav16d-dv11A0A075B617 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav16d-dv11A0A075B617 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC10.7□□□□□ -0.7
Trav16d-dv11A0A075B617 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav16d-dv11A0A075B617 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC10.7□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms