Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ube4bQ9ES00 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ube4bQ9ES00 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Ube4bQ9ES00 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ube4bQ9ES00 Gm13836-201ENSMUST00000121159 501 ntBASIC14.06□□□□□ -0.16
Ube4bQ9ES00 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Ube4bQ9ES00 Gm6659-201ENSMUST00000174752 547 ntBASIC14.06□□□□□ -0.16
Ube4bQ9ES00 Gm23634-201ENSMUST00000175071 91 ntBASIC14.06□□□□□ -0.16
Ube4bQ9ES00 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ube4bQ9ES00 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ube4bQ9ES00 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.06□□□□□ -0.16
Ube4bQ9ES00 CT009713.7-201ENSMUST00000224689 571 ntBASIC14.06□□□□□ -0.16
Ube4bQ9ES00 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC14.06□□□□□ -0.16
Ube4bQ9ES00 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ube4bQ9ES00 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ube4bQ9ES00 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ube4bQ9ES00 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ube4bQ9ES00 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ube4bQ9ES00 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ube4bQ9ES00 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ube4bQ9ES00 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC14.06□□□□□ -0.16
Ube4bQ9ES00 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ube4bQ9ES00 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ube4bQ9ES00 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ube4bQ9ES00 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ube4bQ9ES00 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ube4bQ9ES00 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.05□□□□□ -0.16
Ube4bQ9ES00 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ube4bQ9ES00 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ube4bQ9ES00 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ube4bQ9ES00 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ube4bQ9ES00 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ube4bQ9ES00 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ube4bQ9ES00 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ube4bQ9ES00 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ube4bQ9ES00 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC14.05□□□□□ -0.16
Ube4bQ9ES00 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Ube4bQ9ES00 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ube4bQ9ES00 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ube4bQ9ES00 Gm6345-202ENSMUST00000180900 204 ntBASIC14.05□□□□□ -0.16
Ube4bQ9ES00 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ube4bQ9ES00 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ube4bQ9ES00 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ube4bQ9ES00 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Ube4bQ9ES00 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ube4bQ9ES00 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ube4bQ9ES00 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC14.05□□□□□ -0.16
Ube4bQ9ES00 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ube4bQ9ES00 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ube4bQ9ES00 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ube4bQ9ES00 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ube4bQ9ES00 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ube4bQ9ES00 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ube4bQ9ES00 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ube4bQ9ES00 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ube4bQ9ES00 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ube4bQ9ES00 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ube4bQ9ES00 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ube4bQ9ES00 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ube4bQ9ES00 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ube4bQ9ES00 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ube4bQ9ES00 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Ube4bQ9ES00 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Ube4bQ9ES00 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ube4bQ9ES00 Gm44065-201ENSMUST00000203184 3527 ntBASIC14.04□□□□□ -0.16
Ube4bQ9ES00 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ube4bQ9ES00 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ube4bQ9ES00 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ube4bQ9ES00 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ube4bQ9ES00 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ube4bQ9ES00 AA414768-201ENSMUST00000121924 1257 ntBASIC14.04□□□□□ -0.16
Ube4bQ9ES00 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ube4bQ9ES00 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ube4bQ9ES00 Ighv6-1-201ENSMUST00000193612 343 ntBASIC14.04□□□□□ -0.16
Ube4bQ9ES00 Gm17808-201ENSMUST00000200859 894 ntBASIC14.04□□□□□ -0.16
Ube4bQ9ES00 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ube4bQ9ES00 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ube4bQ9ES00 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ube4bQ9ES00 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ube4bQ9ES00 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Ube4bQ9ES00 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ube4bQ9ES00 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ube4bQ9ES00 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ube4bQ9ES00 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ube4bQ9ES00 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ube4bQ9ES00 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ube4bQ9ES00 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ube4bQ9ES00 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ube4bQ9ES00 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Ube4bQ9ES00 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ube4bQ9ES00 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ube4bQ9ES00 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ube4bQ9ES00 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ube4bQ9ES00 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ube4bQ9ES00 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Ube4bQ9ES00 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.03□□□□□ -0.16
Ube4bQ9ES00 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ube4bQ9ES00 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ube4bQ9ES00 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ube4bQ9ES00 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms