Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vps35Q9EQH3 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vps35Q9EQH3 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Vps35Q9EQH3 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC14.63□□□□□ -0.07
Vps35Q9EQH3 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vps35Q9EQH3 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Vps35Q9EQH3 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.63□□□□□ -0.07
Vps35Q9EQH3 Nrn1-204ENSMUST00000224323 1779 ntBASIC14.62□□□□□ -0.07
Vps35Q9EQH3 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vps35Q9EQH3 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.62□□□□□ -0.07
Vps35Q9EQH3 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vps35Q9EQH3 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vps35Q9EQH3 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.62□□□□□ -0.07
Vps35Q9EQH3 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vps35Q9EQH3 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vps35Q9EQH3 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vps35Q9EQH3 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vps35Q9EQH3 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vps35Q9EQH3 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC14.62□□□□□ -0.07
Vps35Q9EQH3 Gm12134-201ENSMUST00000122109 520 ntBASIC14.62□□□□□ -0.07
Vps35Q9EQH3 Gm5648-201ENSMUST00000122244 1587 ntBASIC14.62□□□□□ -0.07
Vps35Q9EQH3 Gm14822-201ENSMUST00000122247 291 ntBASIC14.62□□□□□ -0.07
Vps35Q9EQH3 Mir1895-201ENSMUST00000122615 79 ntBASIC14.62□□□□□ -0.07
Vps35Q9EQH3 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.62□□□□□ -0.07
Vps35Q9EQH3 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vps35Q9EQH3 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
Vps35Q9EQH3 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC14.62□□□□□ -0.07
Vps35Q9EQH3 Gm27702-201ENSMUST00000184512 56 ntBASIC14.62□□□□□ -0.07
Vps35Q9EQH3 Gm27494-201ENSMUST00000184735 189 ntBASIC14.62□□□□□ -0.07
Vps35Q9EQH3 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vps35Q9EQH3 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vps35Q9EQH3 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC14.62□□□□□ -0.07
Vps35Q9EQH3 CT030684.1-201ENSMUST00000227292 914 ntBASIC14.62□□□□□ -0.07
Vps35Q9EQH3 Gpr146-202ENSMUST00000053120 1040 ntBASIC14.62□□□□□ -0.07
Vps35Q9EQH3 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Vps35Q9EQH3 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vps35Q9EQH3 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vps35Q9EQH3 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Vps35Q9EQH3 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vps35Q9EQH3 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vps35Q9EQH3 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vps35Q9EQH3 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vps35Q9EQH3 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vps35Q9EQH3 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vps35Q9EQH3 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vps35Q9EQH3 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vps35Q9EQH3 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps35Q9EQH3 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps35Q9EQH3 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Vps35Q9EQH3 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Vps35Q9EQH3 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps35Q9EQH3 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.61□□□□□ -0.07
Vps35Q9EQH3 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.61□□□□□ -0.07
Vps35Q9EQH3 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Vps35Q9EQH3 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps35Q9EQH3 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps35Q9EQH3 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps35Q9EQH3 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.61□□□□□ -0.07
Vps35Q9EQH3 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.61□□□□□ -0.07
Vps35Q9EQH3 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.61□□□□□ -0.07
Vps35Q9EQH3 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Vps35Q9EQH3 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps35Q9EQH3 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps35Q9EQH3 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.61□□□□□ -0.07
Vps35Q9EQH3 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Vps35Q9EQH3 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps35Q9EQH3 Gm6736-201ENSMUST00000166583 948 ntBASIC14.61□□□□□ -0.07
Vps35Q9EQH3 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps35Q9EQH3 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC14.61□□□□□ -0.07
Vps35Q9EQH3 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC14.61□□□□□ -0.07
Vps35Q9EQH3 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Vps35Q9EQH3 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Vps35Q9EQH3 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Vps35Q9EQH3 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps35Q9EQH3 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps35Q9EQH3 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps35Q9EQH3 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps35Q9EQH3 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps35Q9EQH3 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps35Q9EQH3 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps35Q9EQH3 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps35Q9EQH3 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps35Q9EQH3 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Vps35Q9EQH3 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps35Q9EQH3 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps35Q9EQH3 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Vps35Q9EQH3 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Vps35Q9EQH3 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Vps35Q9EQH3 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps35Q9EQH3 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps35Q9EQH3 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps35Q9EQH3 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
Vps35Q9EQH3 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps35Q9EQH3 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
Vps35Q9EQH3 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps35Q9EQH3 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.6□□□□□ -0.07
Vps35Q9EQH3 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps35Q9EQH3 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC14.6□□□□□ -0.07
Vps35Q9EQH3 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC14.6□□□□□ -0.07
Vps35Q9EQH3 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms