Protein–RNA interactions for Protein: Q9EQG9

Col4a3bp, Collagen type IV alpha-3-binding protein, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bpQ9EQG9 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col4a3bpQ9EQG9 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC16.74■□□□□ 0.27
Col4a3bpQ9EQG9 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col4a3bpQ9EQG9 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Col4a3bpQ9EQG9 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col4a3bpQ9EQG9 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Col4a3bpQ9EQG9 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col4a3bpQ9EQG9 H2af-ps-201ENSMUST00000119066 295 ntBASIC16.74■□□□□ 0.27
Col4a3bpQ9EQG9 Gm14822-201ENSMUST00000122247 291 ntBASIC16.74■□□□□ 0.27
Col4a3bpQ9EQG9 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC16.74■□□□□ 0.27
Col4a3bpQ9EQG9 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC16.74■□□□□ 0.27
Col4a3bpQ9EQG9 Mir7036b-201ENSMUST00000184791 63 ntBASIC16.74■□□□□ 0.27
Col4a3bpQ9EQG9 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC16.74■□□□□ 0.27
Col4a3bpQ9EQG9 AC154572.2-201ENSMUST00000225105 997 ntBASIC16.74■□□□□ 0.27
Col4a3bpQ9EQG9 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col4a3bpQ9EQG9 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Col4a3bpQ9EQG9 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col4a3bpQ9EQG9 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Col4a3bpQ9EQG9 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC16.74■□□□□ 0.27
Col4a3bpQ9EQG9 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col4a3bpQ9EQG9 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col4a3bpQ9EQG9 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Col4a3bpQ9EQG9 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col4a3bpQ9EQG9 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Col4a3bpQ9EQG9 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col4a3bpQ9EQG9 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC16.74■□□□□ 0.27
Col4a3bpQ9EQG9 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col4a3bpQ9EQG9 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Col4a3bpQ9EQG9 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col4a3bpQ9EQG9 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col4a3bpQ9EQG9 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Col4a3bpQ9EQG9 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col4a3bpQ9EQG9 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col4a3bpQ9EQG9 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col4a3bpQ9EQG9 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Col4a3bpQ9EQG9 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col4a3bpQ9EQG9 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col4a3bpQ9EQG9 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Col4a3bpQ9EQG9 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col4a3bpQ9EQG9 Gm4913-201ENSMUST00000117075 1290 ntBASIC16.73■□□□□ 0.27
Col4a3bpQ9EQG9 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Col4a3bpQ9EQG9 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC16.73■□□□□ 0.27
Col4a3bpQ9EQG9 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Col4a3bpQ9EQG9 Gm17968-201ENSMUST00000194902 784 ntBASIC16.73■□□□□ 0.27
Col4a3bpQ9EQG9 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Col4a3bpQ9EQG9 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC16.73■□□□□ 0.27
Col4a3bpQ9EQG9 Ndufaf2-202ENSMUST00000223734 556 ntBASIC16.73■□□□□ 0.27
Col4a3bpQ9EQG9 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col4a3bpQ9EQG9 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Col4a3bpQ9EQG9 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col4a3bpQ9EQG9 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col4a3bpQ9EQG9 Tcf21-202ENSMUST00000218002 1788 ntBASIC16.73■□□□□ 0.27
Col4a3bpQ9EQG9 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col4a3bpQ9EQG9 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col4a3bpQ9EQG9 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC16.73■□□□□ 0.27
Col4a3bpQ9EQG9 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col4a3bpQ9EQG9 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC16.73■□□□□ 0.27
Col4a3bpQ9EQG9 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col4a3bpQ9EQG9 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col4a3bpQ9EQG9 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Col4a3bpQ9EQG9 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col4a3bpQ9EQG9 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Col4a3bpQ9EQG9 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC16.72■□□□□ 0.27
Col4a3bpQ9EQG9 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col4a3bpQ9EQG9 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC16.72■□□□□ 0.27
Col4a3bpQ9EQG9 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col4a3bpQ9EQG9 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC16.72■□□□□ 0.27
Col4a3bpQ9EQG9 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col4a3bpQ9EQG9 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col4a3bpQ9EQG9 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col4a3bpQ9EQG9 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col4a3bpQ9EQG9 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Col4a3bpQ9EQG9 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC16.72■□□□□ 0.27
Col4a3bpQ9EQG9 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC16.72■□□□□ 0.27
Col4a3bpQ9EQG9 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC16.72■□□□□ 0.27
Col4a3bpQ9EQG9 Gm2272-201ENSMUST00000194903 582 ntBASIC16.72■□□□□ 0.27
Col4a3bpQ9EQG9 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col4a3bpQ9EQG9 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col4a3bpQ9EQG9 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Col4a3bpQ9EQG9 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col4a3bpQ9EQG9 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC16.72■□□□□ 0.27
Col4a3bpQ9EQG9 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col4a3bpQ9EQG9 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col4a3bpQ9EQG9 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Col4a3bpQ9EQG9 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col4a3bpQ9EQG9 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Col4a3bpQ9EQG9 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Col4a3bpQ9EQG9 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Col4a3bpQ9EQG9 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Col4a3bpQ9EQG9 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC16.72■□□□□ 0.27
Col4a3bpQ9EQG9 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col4a3bpQ9EQG9 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Col4a3bpQ9EQG9 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC16.71■□□□□ 0.27
Col4a3bpQ9EQG9 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col4a3bpQ9EQG9 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC16.71■□□□□ 0.27
Col4a3bpQ9EQG9 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col4a3bpQ9EQG9 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Col4a3bpQ9EQG9 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col4a3bpQ9EQG9 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col4a3bpQ9EQG9 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms