Protein–RNA interactions for Protein: Q9DCF9

Ssr3, Translocon-associated protein subunit gamma, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr3Q9DCF9 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ssr3Q9DCF9 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ssr3Q9DCF9 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ssr3Q9DCF9 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ssr3Q9DCF9 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ssr3Q9DCF9 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ssr3Q9DCF9 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ssr3Q9DCF9 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ssr3Q9DCF9 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ssr3Q9DCF9 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
Ssr3Q9DCF9 Gm7901-201ENSMUST00000120430 1597 ntBASIC13.06□□□□□ -0.32
Ssr3Q9DCF9 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ssr3Q9DCF9 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ssr3Q9DCF9 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Ssr3Q9DCF9 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ssr3Q9DCF9 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ssr3Q9DCF9 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ssr3Q9DCF9 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Ssr3Q9DCF9 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Ssr3Q9DCF9 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ssr3Q9DCF9 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.05□□□□□ -0.32
Ssr3Q9DCF9 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ssr3Q9DCF9 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ssr3Q9DCF9 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Ssr3Q9DCF9 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ssr3Q9DCF9 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.05□□□□□ -0.32
Ssr3Q9DCF9 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ssr3Q9DCF9 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ssr3Q9DCF9 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ssr3Q9DCF9 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ssr3Q9DCF9 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC13.05□□□□□ -0.32
Ssr3Q9DCF9 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ssr3Q9DCF9 Gm6623-201ENSMUST00000173570 544 ntBASIC13.05□□□□□ -0.32
Ssr3Q9DCF9 Gm20472-201ENSMUST00000174403 1240 ntBASIC13.05□□□□□ -0.32
Ssr3Q9DCF9 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ssr3Q9DCF9 AC112142.1-201ENSMUST00000228796 918 ntBASIC13.05□□□□□ -0.32
Ssr3Q9DCF9 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Ssr3Q9DCF9 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ssr3Q9DCF9 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ssr3Q9DCF9 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ssr3Q9DCF9 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ssr3Q9DCF9 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ssr3Q9DCF9 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ssr3Q9DCF9 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Ssr3Q9DCF9 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.05□□□□□ -0.32
Ssr3Q9DCF9 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ssr3Q9DCF9 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ssr3Q9DCF9 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ssr3Q9DCF9 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.05□□□□□ -0.32
Ssr3Q9DCF9 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.05□□□□□ -0.32
Ssr3Q9DCF9 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ssr3Q9DCF9 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Ssr3Q9DCF9 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ssr3Q9DCF9 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ssr3Q9DCF9 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ssr3Q9DCF9 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ssr3Q9DCF9 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ssr3Q9DCF9 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Ssr3Q9DCF9 Gm13312-201ENSMUST00000119631 718 ntBASIC13.04□□□□□ -0.32
Ssr3Q9DCF9 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC13.04□□□□□ -0.32
Ssr3Q9DCF9 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC13.04□□□□□ -0.32
Ssr3Q9DCF9 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Ssr3Q9DCF9 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Ssr3Q9DCF9 Vti1a-206ENSMUST00000225529 1244 ntBASIC13.04□□□□□ -0.32
Ssr3Q9DCF9 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ssr3Q9DCF9 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Ssr3Q9DCF9 Gm10812-201ENSMUST00000099864 546 ntBASIC13.04□□□□□ -0.32
Ssr3Q9DCF9 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ssr3Q9DCF9 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Ssr3Q9DCF9 Gm29361-201ENSMUST00000183323 2000 ntBASIC13.04□□□□□ -0.32
Ssr3Q9DCF9 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ssr3Q9DCF9 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC13.04□□□□□ -0.32
Ssr3Q9DCF9 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ssr3Q9DCF9 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Ssr3Q9DCF9 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ssr3Q9DCF9 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ssr3Q9DCF9 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ssr3Q9DCF9 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ssr3Q9DCF9 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ssr3Q9DCF9 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ssr3Q9DCF9 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ssr3Q9DCF9 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ssr3Q9DCF9 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ssr3Q9DCF9 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ssr3Q9DCF9 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ssr3Q9DCF9 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.04□□□□□ -0.32
Ssr3Q9DCF9 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ssr3Q9DCF9 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ssr3Q9DCF9 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC13.03□□□□□ -0.32
Ssr3Q9DCF9 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.03□□□□□ -0.32
Ssr3Q9DCF9 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Ssr3Q9DCF9 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC13.03□□□□□ -0.32
Ssr3Q9DCF9 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ssr3Q9DCF9 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ssr3Q9DCF9 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ssr3Q9DCF9 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ssr3Q9DCF9 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ssr3Q9DCF9 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ssr3Q9DCF9 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ssr3Q9DCF9 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms