Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Chmp2aQ9DB34 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC15.25■□□□□ 0.03
Chmp2aQ9DB34 Gm13365-201ENSMUST00000121188 973 ntBASIC15.25■□□□□ 0.03
Chmp2aQ9DB34 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC15.25■□□□□ 0.03
Chmp2aQ9DB34 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp2aQ9DB34 AC151286.1-201ENSMUST00000198489 145 ntBASIC15.25■□□□□ 0.03
Chmp2aQ9DB34 CT030684.1-201ENSMUST00000227292 914 ntBASIC15.25■□□□□ 0.03
Chmp2aQ9DB34 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp2aQ9DB34 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp2aQ9DB34 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC15.25■□□□□ 0.03
Chmp2aQ9DB34 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp2aQ9DB34 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp2aQ9DB34 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp2aQ9DB34 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp2aQ9DB34 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp2aQ9DB34 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp2aQ9DB34 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp2aQ9DB34 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp2aQ9DB34 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp2aQ9DB34 Gm13233-201ENSMUST00000118760 1443 ntBASIC15.25■□□□□ 0.03
Chmp2aQ9DB34 Gm13244-201ENSMUST00000118855 1446 ntBASIC15.25■□□□□ 0.03
Chmp2aQ9DB34 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp2aQ9DB34 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp2aQ9DB34 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp2aQ9DB34 Gm13332-201ENSMUST00000120451 1398 ntBASIC15.24■□□□□ 0.03
Chmp2aQ9DB34 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp2aQ9DB34 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp2aQ9DB34 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp2aQ9DB34 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp2aQ9DB34 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp2aQ9DB34 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp2aQ9DB34 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp2aQ9DB34 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp2aQ9DB34 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp2aQ9DB34 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp2aQ9DB34 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC15.24■□□□□ 0.03
Chmp2aQ9DB34 Mir1895-201ENSMUST00000122615 79 ntBASIC15.24■□□□□ 0.03
Chmp2aQ9DB34 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC15.24■□□□□ 0.03
Chmp2aQ9DB34 Gm45612-201ENSMUST00000211320 160 ntBASIC15.24■□□□□ 0.03
Chmp2aQ9DB34 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp2aQ9DB34 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
Chmp2aQ9DB34 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp2aQ9DB34 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp2aQ9DB34 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Chmp2aQ9DB34 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp2aQ9DB34 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp2aQ9DB34 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp2aQ9DB34 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC15.24■□□□□ 0.03
Chmp2aQ9DB34 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp2aQ9DB34 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp2aQ9DB34 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC15.24■□□□□ 0.03
Chmp2aQ9DB34 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp2aQ9DB34 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp2aQ9DB34 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp2aQ9DB34 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp2aQ9DB34 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp2aQ9DB34 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Chmp2aQ9DB34 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp2aQ9DB34 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp2aQ9DB34 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp2aQ9DB34 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp2aQ9DB34 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp2aQ9DB34 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp2aQ9DB34 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp2aQ9DB34 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp2aQ9DB34 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp2aQ9DB34 Carlr-201ENSMUST00000181515 2574 ntBASIC15.23■□□□□ 0.03
Chmp2aQ9DB34 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp2aQ9DB34 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp2aQ9DB34 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Chmp2aQ9DB34 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp2aQ9DB34 Gm6973-201ENSMUST00000117080 721 ntBASIC15.23■□□□□ 0.03
Chmp2aQ9DB34 Gm12017-201ENSMUST00000122453 1003 ntBASIC15.23■□□□□ 0.03
Chmp2aQ9DB34 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp2aQ9DB34 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp2aQ9DB34 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Chmp2aQ9DB34 Klk2-ps-201ENSMUST00000205342 571 ntBASIC15.23■□□□□ 0.03
Chmp2aQ9DB34 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp2aQ9DB34 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp2aQ9DB34 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC15.23■□□□□ 0.03
Chmp2aQ9DB34 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp2aQ9DB34 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp2aQ9DB34 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp2aQ9DB34 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp2aQ9DB34 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp2aQ9DB34 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp2aQ9DB34 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp2aQ9DB34 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp2aQ9DB34 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp2aQ9DB34 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp2aQ9DB34 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp2aQ9DB34 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp2aQ9DB34 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp2aQ9DB34 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp2aQ9DB34 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp2aQ9DB34 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp2aQ9DB34 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Chmp2aQ9DB34 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp2aQ9DB34 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Chmp2aQ9DB34 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms