Protein–RNA interactions for Protein: Q9D9M4

Pdzd9, PDZ domain-containing protein 9, mousemouse

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdzd9Q9D9M4 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pdzd9Q9D9M4 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC18.42■□□□□ 0.54
Pdzd9Q9D9M4 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC18.42■□□□□ 0.54
Pdzd9Q9D9M4 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC18.42■□□□□ 0.54
Pdzd9Q9D9M4 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pdzd9Q9D9M4 AC139580.1-202ENSMUST00000223574 928 ntBASIC18.42■□□□□ 0.54
Pdzd9Q9D9M4 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pdzd9Q9D9M4 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pdzd9Q9D9M4 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pdzd9Q9D9M4 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pdzd9Q9D9M4 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pdzd9Q9D9M4 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pdzd9Q9D9M4 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pdzd9Q9D9M4 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
Pdzd9Q9D9M4 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pdzd9Q9D9M4 AC166574.6-201ENSMUST00000227889 1806 ntBASIC18.42■□□□□ 0.54
Pdzd9Q9D9M4 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pdzd9Q9D9M4 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pdzd9Q9D9M4 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pdzd9Q9D9M4 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pdzd9Q9D9M4 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pdzd9Q9D9M4 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pdzd9Q9D9M4 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pdzd9Q9D9M4 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pdzd9Q9D9M4 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pdzd9Q9D9M4 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
Pdzd9Q9D9M4 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pdzd9Q9D9M4 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pdzd9Q9D9M4 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pdzd9Q9D9M4 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pdzd9Q9D9M4 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pdzd9Q9D9M4 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Pdzd9Q9D9M4 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Pdzd9Q9D9M4 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC18.41■□□□□ 0.54
Pdzd9Q9D9M4 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pdzd9Q9D9M4 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Pdzd9Q9D9M4 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pdzd9Q9D9M4 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Pdzd9Q9D9M4 Gm8602-201ENSMUST00000184045 607 ntBASIC18.41■□□□□ 0.54
Pdzd9Q9D9M4 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC18.41■□□□□ 0.54
Pdzd9Q9D9M4 Gm19220-201ENSMUST00000222682 803 ntBASIC18.41■□□□□ 0.54
Pdzd9Q9D9M4 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pdzd9Q9D9M4 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pdzd9Q9D9M4 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pdzd9Q9D9M4 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pdzd9Q9D9M4 Gm42918-201ENSMUST00000199249 1580 ntBASIC18.41■□□□□ 0.54
Pdzd9Q9D9M4 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pdzd9Q9D9M4 Gm14452-201ENSMUST00000118680 1632 ntBASIC18.41■□□□□ 0.54
Pdzd9Q9D9M4 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pdzd9Q9D9M4 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
Pdzd9Q9D9M4 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pdzd9Q9D9M4 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pdzd9Q9D9M4 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pdzd9Q9D9M4 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pdzd9Q9D9M4 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pdzd9Q9D9M4 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Pdzd9Q9D9M4 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Pdzd9Q9D9M4 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Pdzd9Q9D9M4 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pdzd9Q9D9M4 Gm15957-201ENSMUST00000118893 974 ntBASIC18.4■□□□□ 0.54
Pdzd9Q9D9M4 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Pdzd9Q9D9M4 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pdzd9Q9D9M4 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pdzd9Q9D9M4 AC162801.1-201ENSMUST00000220612 198 ntBASIC18.4■□□□□ 0.54
Pdzd9Q9D9M4 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pdzd9Q9D9M4 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pdzd9Q9D9M4 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Pdzd9Q9D9M4 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC18.4■□□□□ 0.54
Pdzd9Q9D9M4 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Pdzd9Q9D9M4 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pdzd9Q9D9M4 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pdzd9Q9D9M4 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Pdzd9Q9D9M4 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pdzd9Q9D9M4 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pdzd9Q9D9M4 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pdzd9Q9D9M4 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pdzd9Q9D9M4 Gm15678-201ENSMUST00000117573 960 ntBASIC18.39■□□□□ 0.53
Pdzd9Q9D9M4 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pdzd9Q9D9M4 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC18.39■□□□□ 0.53
Pdzd9Q9D9M4 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pdzd9Q9D9M4 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC18.39■□□□□ 0.53
Pdzd9Q9D9M4 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC18.39■□□□□ 0.53
Pdzd9Q9D9M4 AC149294.4-201ENSMUST00000227870 882 ntBASIC18.39■□□□□ 0.53
Pdzd9Q9D9M4 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pdzd9Q9D9M4 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pdzd9Q9D9M4 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pdzd9Q9D9M4 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pdzd9Q9D9M4 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pdzd9Q9D9M4 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pdzd9Q9D9M4 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pdzd9Q9D9M4 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pdzd9Q9D9M4 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pdzd9Q9D9M4 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pdzd9Q9D9M4 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pdzd9Q9D9M4 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC18.38■□□□□ 0.53
Pdzd9Q9D9M4 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC18.38■□□□□ 0.53
Pdzd9Q9D9M4 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC18.38■□□□□ 0.53
Pdzd9Q9D9M4 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Pdzd9Q9D9M4 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pdzd9Q9D9M4 Gm5354-201ENSMUST00000182417 973 ntBASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms