Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Gm6443-201ENSMUST00000203599 874 ntBASIC18.36■□□□□ 0.53
Chmp4bQ9D8B3 Gm44771-201ENSMUST00000206975 626 ntBASIC18.36■□□□□ 0.53
Chmp4bQ9D8B3 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Chmp4bQ9D8B3 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Chmp4bQ9D8B3 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp4bQ9D8B3 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp4bQ9D8B3 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Chmp4bQ9D8B3 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp4bQ9D8B3 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp4bQ9D8B3 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Chmp4bQ9D8B3 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp4bQ9D8B3 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp4bQ9D8B3 Ksr1-207ENSMUST00000226282 5260 ntBASIC18.36■□□□□ 0.53
Chmp4bQ9D8B3 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Chmp4bQ9D8B3 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chmp4bQ9D8B3 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chmp4bQ9D8B3 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chmp4bQ9D8B3 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Chmp4bQ9D8B3 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Chmp4bQ9D8B3 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chmp4bQ9D8B3 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chmp4bQ9D8B3 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chmp4bQ9D8B3 Gm11543-201ENSMUST00000120758 370 ntBASIC18.35■□□□□ 0.53
Chmp4bQ9D8B3 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Chmp4bQ9D8B3 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC18.35■□□□□ 0.53
Chmp4bQ9D8B3 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chmp4bQ9D8B3 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC18.35■□□□□ 0.53
Chmp4bQ9D8B3 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC18.35■□□□□ 0.53
Chmp4bQ9D8B3 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Chmp4bQ9D8B3 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC18.35■□□□□ 0.53
Chmp4bQ9D8B3 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chmp4bQ9D8B3 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chmp4bQ9D8B3 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chmp4bQ9D8B3 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chmp4bQ9D8B3 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC18.35■□□□□ 0.53
Chmp4bQ9D8B3 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Chmp4bQ9D8B3 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC18.35■□□□□ 0.53
Chmp4bQ9D8B3 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC18.35■□□□□ 0.53
Chmp4bQ9D8B3 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chmp4bQ9D8B3 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC18.35■□□□□ 0.53
Chmp4bQ9D8B3 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chmp4bQ9D8B3 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chmp4bQ9D8B3 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Chmp4bQ9D8B3 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC18.34■□□□□ 0.53
Chmp4bQ9D8B3 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Chmp4bQ9D8B3 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
Chmp4bQ9D8B3 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chmp4bQ9D8B3 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chmp4bQ9D8B3 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chmp4bQ9D8B3 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Chmp4bQ9D8B3 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chmp4bQ9D8B3 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Chmp4bQ9D8B3 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Chmp4bQ9D8B3 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC18.34■□□□□ 0.53
Chmp4bQ9D8B3 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC18.34■□□□□ 0.53
Chmp4bQ9D8B3 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Chmp4bQ9D8B3 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Chmp4bQ9D8B3 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Chmp4bQ9D8B3 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chmp4bQ9D8B3 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC18.34■□□□□ 0.53
Chmp4bQ9D8B3 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chmp4bQ9D8B3 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Chmp4bQ9D8B3 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chmp4bQ9D8B3 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chmp4bQ9D8B3 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC18.34■□□□□ 0.53
Chmp4bQ9D8B3 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Chmp4bQ9D8B3 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chmp4bQ9D8B3 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chmp4bQ9D8B3 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chmp4bQ9D8B3 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Chmp4bQ9D8B3 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chmp4bQ9D8B3 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Chmp4bQ9D8B3 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Chmp4bQ9D8B3 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Chmp4bQ9D8B3 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Chmp4bQ9D8B3 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Chmp4bQ9D8B3 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC18.33■□□□□ 0.53
Chmp4bQ9D8B3 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Chmp4bQ9D8B3 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Chmp4bQ9D8B3 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Chmp4bQ9D8B3 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chmp4bQ9D8B3 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chmp4bQ9D8B3 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC18.33■□□□□ 0.52
Chmp4bQ9D8B3 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Chmp4bQ9D8B3 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Chmp4bQ9D8B3 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC18.33■□□□□ 0.52
Chmp4bQ9D8B3 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Chmp4bQ9D8B3 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC18.33■□□□□ 0.52
Chmp4bQ9D8B3 CT030684.1-201ENSMUST00000227292 914 ntBASIC18.33■□□□□ 0.52
Chmp4bQ9D8B3 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Chmp4bQ9D8B3 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC18.33■□□□□ 0.52
Chmp4bQ9D8B3 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chmp4bQ9D8B3 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chmp4bQ9D8B3 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chmp4bQ9D8B3 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chmp4bQ9D8B3 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chmp4bQ9D8B3 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Chmp4bQ9D8B3 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chmp4bQ9D8B3 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
Chmp4bQ9D8B3 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms