Protein–RNA interactions for Protein: Q9D541

Ccdc7, Coiled-coil domain-containing protein 7, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc7Q9D541 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc7Q9D541 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC17.07■□□□□ 0.32
Ccdc7Q9D541 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Ccdc7Q9D541 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Ccdc7Q9D541 Gm14140-201ENSMUST00000119999 995 ntBASIC17.07■□□□□ 0.32
Ccdc7Q9D541 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc7Q9D541 Gm5479-201ENSMUST00000160578 435 ntBASIC17.07■□□□□ 0.32
Ccdc7Q9D541 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC17.07■□□□□ 0.32
Ccdc7Q9D541 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Ccdc7Q9D541 Gm45098-201ENSMUST00000207179 657 ntBASIC17.07■□□□□ 0.32
Ccdc7Q9D541 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Ccdc7Q9D541 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc7Q9D541 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
Ccdc7Q9D541 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Ccdc7Q9D541 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc7Q9D541 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Ccdc7Q9D541 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc7Q9D541 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc7Q9D541 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Ccdc7Q9D541 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc7Q9D541 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc7Q9D541 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc7Q9D541 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc7Q9D541 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc7Q9D541 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc7Q9D541 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc7Q9D541 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Ccdc7Q9D541 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc7Q9D541 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc7Q9D541 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Ccdc7Q9D541 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC17.06■□□□□ 0.32
Ccdc7Q9D541 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC17.06■□□□□ 0.32
Ccdc7Q9D541 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Ccdc7Q9D541 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc7Q9D541 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc7Q9D541 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc7Q9D541 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Ccdc7Q9D541 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC17.06■□□□□ 0.32
Ccdc7Q9D541 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc7Q9D541 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC17.06■□□□□ 0.32
Ccdc7Q9D541 Gm44945-201ENSMUST00000206764 1187 ntBASIC17.06■□□□□ 0.32
Ccdc7Q9D541 AC102291.3-201ENSMUST00000226566 405 ntBASIC17.06■□□□□ 0.32
Ccdc7Q9D541 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Ccdc7Q9D541 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Ccdc7Q9D541 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc7Q9D541 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc7Q9D541 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc7Q9D541 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc7Q9D541 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc7Q9D541 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Ccdc7Q9D541 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc7Q9D541 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc7Q9D541 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc7Q9D541 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Ccdc7Q9D541 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc7Q9D541 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC17.05■□□□□ 0.32
Ccdc7Q9D541 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc7Q9D541 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc7Q9D541 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc7Q9D541 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc7Q9D541 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc7Q9D541 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc7Q9D541 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
Ccdc7Q9D541 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc7Q9D541 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc7Q9D541 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc7Q9D541 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Ccdc7Q9D541 Gm26513-201ENSMUST00000181802 2489 ntBASIC17.05■□□□□ 0.32
Ccdc7Q9D541 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc7Q9D541 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc7Q9D541 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc7Q9D541 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC17.05■□□□□ 0.32
Ccdc7Q9D541 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Ccdc7Q9D541 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC17.05■□□□□ 0.32
Ccdc7Q9D541 Gm7461-201ENSMUST00000058918 827 ntBASIC17.05■□□□□ 0.32
Ccdc7Q9D541 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Ccdc7Q9D541 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc7Q9D541 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc7Q9D541 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc7Q9D541 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc7Q9D541 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC17.05■□□□□ 0.32
Ccdc7Q9D541 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Ccdc7Q9D541 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc7Q9D541 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc7Q9D541 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc7Q9D541 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc7Q9D541 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc7Q9D541 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc7Q9D541 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc7Q9D541 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc7Q9D541 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Ccdc7Q9D541 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc7Q9D541 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Ccdc7Q9D541 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc7Q9D541 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc7Q9D541 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Ccdc7Q9D541 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc7Q9D541 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc7Q9D541 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC17.04■□□□□ 0.32
Ccdc7Q9D541 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms