Protein–RNA interactions for Protein: Q9CZQ6

Raet1e, Retinoic acid early-inducible protein 1-epsilon, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1eQ9CZQ6 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Raet1eQ9CZQ6 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Raet1eQ9CZQ6 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Raet1eQ9CZQ6 Gm12500-202ENSMUST00000186471 2428 ntBASIC12.83□□□□□ -0.36
Raet1eQ9CZQ6 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Raet1eQ9CZQ6 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Raet1eQ9CZQ6 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Raet1eQ9CZQ6 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Raet1eQ9CZQ6 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Raet1eQ9CZQ6 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Raet1eQ9CZQ6 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Raet1eQ9CZQ6 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Raet1eQ9CZQ6 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Raet1eQ9CZQ6 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Raet1eQ9CZQ6 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Raet1eQ9CZQ6 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.82□□□□□ -0.36
Raet1eQ9CZQ6 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Raet1eQ9CZQ6 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Raet1eQ9CZQ6 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Raet1eQ9CZQ6 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Raet1eQ9CZQ6 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Raet1eQ9CZQ6 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC12.82□□□□□ -0.36
Raet1eQ9CZQ6 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Raet1eQ9CZQ6 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Raet1eQ9CZQ6 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Raet1eQ9CZQ6 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Raet1eQ9CZQ6 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Raet1eQ9CZQ6 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Raet1eQ9CZQ6 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC12.82□□□□□ -0.36
Raet1eQ9CZQ6 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Raet1eQ9CZQ6 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC12.82□□□□□ -0.36
Raet1eQ9CZQ6 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC12.82□□□□□ -0.36
Raet1eQ9CZQ6 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Raet1eQ9CZQ6 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
Raet1eQ9CZQ6 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC12.82□□□□□ -0.36
Raet1eQ9CZQ6 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Raet1eQ9CZQ6 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Raet1eQ9CZQ6 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Raet1eQ9CZQ6 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Raet1eQ9CZQ6 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Raet1eQ9CZQ6 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
Raet1eQ9CZQ6 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Raet1eQ9CZQ6 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Raet1eQ9CZQ6 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
Raet1eQ9CZQ6 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC12.82□□□□□ -0.36
Raet1eQ9CZQ6 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Raet1eQ9CZQ6 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Raet1eQ9CZQ6 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Raet1eQ9CZQ6 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Raet1eQ9CZQ6 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Raet1eQ9CZQ6 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Raet1eQ9CZQ6 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Raet1eQ9CZQ6 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Raet1eQ9CZQ6 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Raet1eQ9CZQ6 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.81□□□□□ -0.36
Raet1eQ9CZQ6 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.81□□□□□ -0.36
Raet1eQ9CZQ6 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Raet1eQ9CZQ6 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Raet1eQ9CZQ6 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Raet1eQ9CZQ6 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Raet1eQ9CZQ6 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Raet1eQ9CZQ6 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Raet1eQ9CZQ6 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Raet1eQ9CZQ6 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Raet1eQ9CZQ6 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Raet1eQ9CZQ6 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Raet1eQ9CZQ6 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Raet1eQ9CZQ6 Gm14042-201ENSMUST00000120139 833 ntBASIC12.81□□□□□ -0.36
Raet1eQ9CZQ6 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Raet1eQ9CZQ6 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC12.81□□□□□ -0.36
Raet1eQ9CZQ6 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Raet1eQ9CZQ6 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
Raet1eQ9CZQ6 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
Raet1eQ9CZQ6 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
Raet1eQ9CZQ6 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
Raet1eQ9CZQ6 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC12.81□□□□□ -0.36
Raet1eQ9CZQ6 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Raet1eQ9CZQ6 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Raet1eQ9CZQ6 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Raet1eQ9CZQ6 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Raet1eQ9CZQ6 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Raet1eQ9CZQ6 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Raet1eQ9CZQ6 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Raet1eQ9CZQ6 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Raet1eQ9CZQ6 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Raet1eQ9CZQ6 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Raet1eQ9CZQ6 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Raet1eQ9CZQ6 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Raet1eQ9CZQ6 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Raet1eQ9CZQ6 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Raet1eQ9CZQ6 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.8□□□□□ -0.36
Raet1eQ9CZQ6 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Raet1eQ9CZQ6 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC12.8□□□□□ -0.36
Raet1eQ9CZQ6 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC12.8□□□□□ -0.36
Raet1eQ9CZQ6 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Raet1eQ9CZQ6 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Raet1eQ9CZQ6 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Raet1eQ9CZQ6 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Raet1eQ9CZQ6 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Raet1eQ9CZQ6 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms