Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
Rnf135Q9CWS1 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf135Q9CWS1 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf135Q9CWS1 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf135Q9CWS1 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf135Q9CWS1 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf135Q9CWS1 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf135Q9CWS1 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Rnf135Q9CWS1 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf135Q9CWS1 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC15.22■□□□□ 0.03
Rnf135Q9CWS1 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf135Q9CWS1 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
Rnf135Q9CWS1 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf135Q9CWS1 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf135Q9CWS1 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Rnf135Q9CWS1 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf135Q9CWS1 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
Rnf135Q9CWS1 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf135Q9CWS1 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf135Q9CWS1 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf135Q9CWS1 Trav13-3-201ENSMUST00000117226 336 ntBASIC15.21■□□□□ 0.03
Rnf135Q9CWS1 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC15.21■□□□□ 0.03
Rnf135Q9CWS1 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf135Q9CWS1 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC15.21■□□□□ 0.03
Rnf135Q9CWS1 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf135Q9CWS1 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC15.21■□□□□ 0.03
Rnf135Q9CWS1 Gm25911-201ENSMUST00000157621 56 ntBASIC15.21■□□□□ 0.03
Rnf135Q9CWS1 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
Rnf135Q9CWS1 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf135Q9CWS1 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf135Q9CWS1 Mir8117-201ENSMUST00000184773 107 ntBASIC15.21■□□□□ 0.03
Rnf135Q9CWS1 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC15.21■□□□□ 0.03
Rnf135Q9CWS1 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Rnf135Q9CWS1 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC15.21■□□□□ 0.03
Rnf135Q9CWS1 AC174742.1-201ENSMUST00000218272 304 ntBASIC15.21■□□□□ 0.03
Rnf135Q9CWS1 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC15.21■□□□□ 0.03
Rnf135Q9CWS1 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf135Q9CWS1 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf135Q9CWS1 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rnf135Q9CWS1 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf135Q9CWS1 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf135Q9CWS1 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf135Q9CWS1 Gm5648-201ENSMUST00000122244 1587 ntBASIC15.2■□□□□ 0.02
Rnf135Q9CWS1 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf135Q9CWS1 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Rnf135Q9CWS1 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
Rnf135Q9CWS1 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf135Q9CWS1 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf135Q9CWS1 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf135Q9CWS1 Gm15593-201ENSMUST00000122085 1008 ntBASIC15.2■□□□□ 0.02
Rnf135Q9CWS1 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf135Q9CWS1 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Rnf135Q9CWS1 Gm10576-201ENSMUST00000191927 825 ntBASIC15.2■□□□□ 0.02
Rnf135Q9CWS1 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf135Q9CWS1 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf135Q9CWS1 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf135Q9CWS1 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Rnf135Q9CWS1 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf135Q9CWS1 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC15.2■□□□□ 0.02
Rnf135Q9CWS1 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf135Q9CWS1 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf135Q9CWS1 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf135Q9CWS1 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf135Q9CWS1 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC15.2■□□□□ 0.02
Rnf135Q9CWS1 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf135Q9CWS1 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf135Q9CWS1 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Rnf135Q9CWS1 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Rnf135Q9CWS1 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC15.2■□□□□ 0.02
Rnf135Q9CWS1 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Rnf135Q9CWS1 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf135Q9CWS1 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC15.19■□□□□ 0.02
Rnf135Q9CWS1 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf135Q9CWS1 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf135Q9CWS1 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Rnf135Q9CWS1 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf135Q9CWS1 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf135Q9CWS1 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf135Q9CWS1 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf135Q9CWS1 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Rnf135Q9CWS1 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC15.19■□□□□ 0.02
Rnf135Q9CWS1 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf135Q9CWS1 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf135Q9CWS1 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf135Q9CWS1 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf135Q9CWS1 Gm4913-201ENSMUST00000117075 1290 ntBASIC15.19■□□□□ 0.02
Rnf135Q9CWS1 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf135Q9CWS1 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC15.19■□□□□ 0.02
Rnf135Q9CWS1 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC15.19■□□□□ 0.02
Rnf135Q9CWS1 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf135Q9CWS1 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC15.19■□□□□ 0.02
Rnf135Q9CWS1 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Rnf135Q9CWS1 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Rnf135Q9CWS1 Bloc1s5-203ENSMUST00000224902 612 ntBASIC15.19■□□□□ 0.02
Rnf135Q9CWS1 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf135Q9CWS1 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf135Q9CWS1 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf135Q9CWS1 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf135Q9CWS1 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf135Q9CWS1 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms