Protein–RNA interactions for Protein: Q9CRC8

Lrrc40, Leucine-rich repeat-containing protein 40, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc40Q9CRC8 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Lrrc40Q9CRC8 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Lrrc40Q9CRC8 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Lrrc40Q9CRC8 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Lrrc40Q9CRC8 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Lrrc40Q9CRC8 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
Lrrc40Q9CRC8 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Lrrc40Q9CRC8 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Lrrc40Q9CRC8 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Lrrc40Q9CRC8 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
Lrrc40Q9CRC8 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Lrrc40Q9CRC8 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lrrc40Q9CRC8 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lrrc40Q9CRC8 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lrrc40Q9CRC8 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.51□□□□□ -0.09
Lrrc40Q9CRC8 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.51□□□□□ -0.09
Lrrc40Q9CRC8 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lrrc40Q9CRC8 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Lrrc40Q9CRC8 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lrrc40Q9CRC8 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lrrc40Q9CRC8 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lrrc40Q9CRC8 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lrrc40Q9CRC8 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Lrrc40Q9CRC8 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Lrrc40Q9CRC8 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Lrrc40Q9CRC8 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Lrrc40Q9CRC8 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lrrc40Q9CRC8 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lrrc40Q9CRC8 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lrrc40Q9CRC8 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lrrc40Q9CRC8 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lrrc40Q9CRC8 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lrrc40Q9CRC8 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lrrc40Q9CRC8 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lrrc40Q9CRC8 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lrrc40Q9CRC8 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lrrc40Q9CRC8 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lrrc40Q9CRC8 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.5□□□□□ -0.09
Lrrc40Q9CRC8 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lrrc40Q9CRC8 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lrrc40Q9CRC8 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lrrc40Q9CRC8 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Lrrc40Q9CRC8 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lrrc40Q9CRC8 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Lrrc40Q9CRC8 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lrrc40Q9CRC8 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lrrc40Q9CRC8 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC14.5□□□□□ -0.09
Lrrc40Q9CRC8 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Lrrc40Q9CRC8 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Lrrc40Q9CRC8 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Lrrc40Q9CRC8 AC154572.2-201ENSMUST00000225105 997 ntBASIC14.5□□□□□ -0.09
Lrrc40Q9CRC8 AC159295.1-201ENSMUST00000225326 940 ntBASIC14.5□□□□□ -0.09
Lrrc40Q9CRC8 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lrrc40Q9CRC8 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lrrc40Q9CRC8 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lrrc40Q9CRC8 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lrrc40Q9CRC8 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lrrc40Q9CRC8 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lrrc40Q9CRC8 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Lrrc40Q9CRC8 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Lrrc40Q9CRC8 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lrrc40Q9CRC8 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.5□□□□□ -0.09
Lrrc40Q9CRC8 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lrrc40Q9CRC8 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
Lrrc40Q9CRC8 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.5□□□□□ -0.09
Lrrc40Q9CRC8 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lrrc40Q9CRC8 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lrrc40Q9CRC8 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lrrc40Q9CRC8 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lrrc40Q9CRC8 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lrrc40Q9CRC8 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.49□□□□□ -0.09
Lrrc40Q9CRC8 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lrrc40Q9CRC8 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Lrrc40Q9CRC8 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.49□□□□□ -0.09
Lrrc40Q9CRC8 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Lrrc40Q9CRC8 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Lrrc40Q9CRC8 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC14.49□□□□□ -0.09
Lrrc40Q9CRC8 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC14.49□□□□□ -0.09
Lrrc40Q9CRC8 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lrrc40Q9CRC8 Gm7461-201ENSMUST00000058918 827 ntBASIC14.49□□□□□ -0.09
Lrrc40Q9CRC8 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
Lrrc40Q9CRC8 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lrrc40Q9CRC8 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Lrrc40Q9CRC8 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Lrrc40Q9CRC8 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lrrc40Q9CRC8 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lrrc40Q9CRC8 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lrrc40Q9CRC8 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lrrc40Q9CRC8 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lrrc40Q9CRC8 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lrrc40Q9CRC8 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Lrrc40Q9CRC8 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lrrc40Q9CRC8 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lrrc40Q9CRC8 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lrrc40Q9CRC8 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lrrc40Q9CRC8 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC14.49□□□□□ -0.09
Lrrc40Q9CRC8 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lrrc40Q9CRC8 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lrrc40Q9CRC8 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lrrc40Q9CRC8 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms