Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cldnd1Q9CQX5 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cldnd1Q9CQX5 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cldnd1Q9CQX5 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cldnd1Q9CQX5 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cldnd1Q9CQX5 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cldnd1Q9CQX5 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cldnd1Q9CQX5 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cldnd1Q9CQX5 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
Cldnd1Q9CQX5 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cldnd1Q9CQX5 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cldnd1Q9CQX5 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cldnd1Q9CQX5 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC14.86□□□□□ -0.03
Cldnd1Q9CQX5 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC14.86□□□□□ -0.03
Cldnd1Q9CQX5 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Cldnd1Q9CQX5 Gm42693-201ENSMUST00000196779 631 ntBASIC14.86□□□□□ -0.03
Cldnd1Q9CQX5 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC14.86□□□□□ -0.03
Cldnd1Q9CQX5 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
Cldnd1Q9CQX5 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC14.86□□□□□ -0.03
Cldnd1Q9CQX5 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cldnd1Q9CQX5 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cldnd1Q9CQX5 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cldnd1Q9CQX5 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.86□□□□□ -0.03
Cldnd1Q9CQX5 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cldnd1Q9CQX5 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Cldnd1Q9CQX5 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cldnd1Q9CQX5 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Cldnd1Q9CQX5 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC14.86□□□□□ -0.03
Cldnd1Q9CQX5 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Cldnd1Q9CQX5 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Cldnd1Q9CQX5 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cldnd1Q9CQX5 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Cldnd1Q9CQX5 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cldnd1Q9CQX5 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cldnd1Q9CQX5 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cldnd1Q9CQX5 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC14.85□□□□□ -0.03
Cldnd1Q9CQX5 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cldnd1Q9CQX5 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cldnd1Q9CQX5 Gm27486-201ENSMUST00000184923 80 ntBASIC14.85□□□□□ -0.03
Cldnd1Q9CQX5 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cldnd1Q9CQX5 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cldnd1Q9CQX5 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC14.85□□□□□ -0.03
Cldnd1Q9CQX5 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cldnd1Q9CQX5 Gm10478-201ENSMUST00000084451 396 ntBASIC14.85□□□□□ -0.03
Cldnd1Q9CQX5 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Cldnd1Q9CQX5 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cldnd1Q9CQX5 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cldnd1Q9CQX5 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cldnd1Q9CQX5 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cldnd1Q9CQX5 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Cldnd1Q9CQX5 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cldnd1Q9CQX5 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cldnd1Q9CQX5 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cldnd1Q9CQX5 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cldnd1Q9CQX5 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cldnd1Q9CQX5 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cldnd1Q9CQX5 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cldnd1Q9CQX5 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.84□□□□□ -0.03
Cldnd1Q9CQX5 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Cldnd1Q9CQX5 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Cldnd1Q9CQX5 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cldnd1Q9CQX5 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cldnd1Q9CQX5 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cldnd1Q9CQX5 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cldnd1Q9CQX5 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Cldnd1Q9CQX5 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Cldnd1Q9CQX5 Olfr582-201ENSMUST00000098212 960 ntBASIC14.84□□□□□ -0.03
Cldnd1Q9CQX5 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cldnd1Q9CQX5 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cldnd1Q9CQX5 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cldnd1Q9CQX5 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cldnd1Q9CQX5 Dancr-204ENSMUST00000132389 2347 ntBASIC14.84□□□□□ -0.03
Cldnd1Q9CQX5 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cldnd1Q9CQX5 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cldnd1Q9CQX5 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cldnd1Q9CQX5 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cldnd1Q9CQX5 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cldnd1Q9CQX5 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Cldnd1Q9CQX5 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cldnd1Q9CQX5 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cldnd1Q9CQX5 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cldnd1Q9CQX5 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Cldnd1Q9CQX5 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Cldnd1Q9CQX5 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Cldnd1Q9CQX5 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cldnd1Q9CQX5 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cldnd1Q9CQX5 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cldnd1Q9CQX5 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cldnd1Q9CQX5 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cldnd1Q9CQX5 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cldnd1Q9CQX5 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cldnd1Q9CQX5 Mir1247-201ENSMUST00000116706 82 ntBASIC14.83□□□□□ -0.04
Cldnd1Q9CQX5 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC14.83□□□□□ -0.04
Cldnd1Q9CQX5 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC14.83□□□□□ -0.04
Cldnd1Q9CQX5 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
Cldnd1Q9CQX5 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cldnd1Q9CQX5 Gm21470-201ENSMUST00000187680 696 ntBASIC14.83□□□□□ -0.04
Cldnd1Q9CQX5 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC14.83□□□□□ -0.04
Cldnd1Q9CQX5 Gm45784-201ENSMUST00000188360 142 ntBASIC14.83□□□□□ -0.04
Cldnd1Q9CQX5 Gm38230-201ENSMUST00000193572 1159 ntBASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms