Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 NME9-203ENST00000383180 2133 ntTSL 2 BASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 CTNS-203ENST00000399306 803 ntTSL 3 BASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 KRT18P13-201ENST00000400056 1290 ntBASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 LBH-204ENST00000406087 559 ntTSL 4 BASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 MED15P5-201ENST00000423150 992 ntBASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 KRT18P27-201ENST00000427733 1299 ntBASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 EML3-212ENST00000494176 2901 ntTSL 2 BASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 EML3-216ENST00000529309 2909 ntTSL 2 BASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 CD63-204ENST00000546939 779 ntTSL 3 BASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 AC145285.3-201ENST00000564603 959 ntBASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 AL139288.1-201ENST00000623748 933 ntBASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 AL022326.1-202ENST00000641533 845 ntBASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 AC092865.6-201ENST00000642101 219 ntBASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 AL353593.2-201ENST00000602529 1483 ntBASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 PMS2P7-201ENST00000506558 1336 ntBASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
KRTAP4-3Q9BYR4 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms