Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rtn4Q99P72 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Rtn4Q99P72 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rtn4Q99P72 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rtn4Q99P72 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rtn4Q99P72 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rtn4Q99P72 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Rtn4Q99P72 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rtn4Q99P72 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC18.79■□□□□ 0.6
Rtn4Q99P72 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC18.79■□□□□ 0.6
Rtn4Q99P72 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rtn4Q99P72 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rtn4Q99P72 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rtn4Q99P72 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
Rtn4Q99P72 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rtn4Q99P72 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rtn4Q99P72 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Rtn4Q99P72 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rtn4Q99P72 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rtn4Q99P72 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rtn4Q99P72 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rtn4Q99P72 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rtn4Q99P72 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rtn4Q99P72 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Rtn4Q99P72 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rtn4Q99P72 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rtn4Q99P72 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rtn4Q99P72 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC18.79■□□□□ 0.6
Rtn4Q99P72 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rtn4Q99P72 Auts2-212ENSMUST00000178555 309 ntBASIC18.79■□□□□ 0.6
Rtn4Q99P72 1700065O20Rik-201ENSMUST00000186872 710 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rtn4Q99P72 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC18.79■□□□□ 0.6
Rtn4Q99P72 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rtn4Q99P72 Gm13410-201ENSMUST00000117058 1415 ntBASIC18.79■□□□□ 0.6
Rtn4Q99P72 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rtn4Q99P72 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
Rtn4Q99P72 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rtn4Q99P72 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rtn4Q99P72 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC18.79■□□□□ 0.6
Rtn4Q99P72 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC18.79■□□□□ 0.6
Rtn4Q99P72 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rtn4Q99P72 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Rtn4Q99P72 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rtn4Q99P72 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rtn4Q99P72 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rtn4Q99P72 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rtn4Q99P72 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rtn4Q99P72 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC18.78■□□□□ 0.6
Rtn4Q99P72 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rtn4Q99P72 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rtn4Q99P72 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Rtn4Q99P72 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Rtn4Q99P72 Gm16198-201ENSMUST00000118766 670 ntBASIC18.78■□□□□ 0.6
Rtn4Q99P72 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
Rtn4Q99P72 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC18.78■□□□□ 0.6
Rtn4Q99P72 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rtn4Q99P72 Tpt1-ps4-201ENSMUST00000210908 503 ntBASIC18.78■□□□□ 0.6
Rtn4Q99P72 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rtn4Q99P72 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC18.78■□□□□ 0.6
Rtn4Q99P72 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Rtn4Q99P72 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rtn4Q99P72 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Rtn4Q99P72 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rtn4Q99P72 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rtn4Q99P72 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rtn4Q99P72 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC18.78■□□□□ 0.6
Rtn4Q99P72 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rtn4Q99P72 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rtn4Q99P72 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rtn4Q99P72 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Rtn4Q99P72 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rtn4Q99P72 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rtn4Q99P72 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
Rtn4Q99P72 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rtn4Q99P72 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Rtn4Q99P72 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rtn4Q99P72 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC18.77■□□□□ 0.6
Rtn4Q99P72 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Rtn4Q99P72 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rtn4Q99P72 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC18.77■□□□□ 0.6
Rtn4Q99P72 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC18.77■□□□□ 0.6
Rtn4Q99P72 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rtn4Q99P72 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Rtn4Q99P72 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC18.77■□□□□ 0.6
Rtn4Q99P72 Gm20553-201ENSMUST00000204205 844 ntBASIC18.77■□□□□ 0.6
Rtn4Q99P72 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC18.77■□□□□ 0.6
Rtn4Q99P72 AC102542.1-201ENSMUST00000225204 1138 ntBASIC18.77■□□□□ 0.6
Rtn4Q99P72 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC18.77■□□□□ 0.6
Rtn4Q99P72 Gm10154-201ENSMUST00000084445 354 ntBASIC18.77■□□□□ 0.6
Rtn4Q99P72 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC18.77■□□□□ 0.6
Rtn4Q99P72 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Rtn4Q99P72 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rtn4Q99P72 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rtn4Q99P72 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC18.77■□□□□ 0.6
Rtn4Q99P72 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Rtn4Q99P72 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Rtn4Q99P72 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Rtn4Q99P72 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Rtn4Q99P72 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rtn4Q99P72 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms