Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tlr3Q99MB1 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC15.68■□□□□ 0.1
Tlr3Q99MB1 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tlr3Q99MB1 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tlr3Q99MB1 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tlr3Q99MB1 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tlr3Q99MB1 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
Tlr3Q99MB1 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Tlr3Q99MB1 Gm12620-201ENSMUST00000119791 1986 ntBASIC15.67■□□□□ 0.1
Tlr3Q99MB1 Gm12612-201ENSMUST00000140182 1986 ntBASIC15.67■□□□□ 0.1
Tlr3Q99MB1 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tlr3Q99MB1 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tlr3Q99MB1 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tlr3Q99MB1 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tlr3Q99MB1 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Tlr3Q99MB1 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Tlr3Q99MB1 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Tlr3Q99MB1 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Tlr3Q99MB1 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tlr3Q99MB1 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tlr3Q99MB1 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tlr3Q99MB1 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Tlr3Q99MB1 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC15.67■□□□□ 0.1
Tlr3Q99MB1 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC15.67■□□□□ 0.1
Tlr3Q99MB1 Gm15483-201ENSMUST00000120338 456 ntBASIC15.67■□□□□ 0.1
Tlr3Q99MB1 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Tlr3Q99MB1 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC15.67■□□□□ 0.1
Tlr3Q99MB1 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
Tlr3Q99MB1 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC15.67■□□□□ 0.1
Tlr3Q99MB1 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Tlr3Q99MB1 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
Tlr3Q99MB1 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Tlr3Q99MB1 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC15.67■□□□□ 0.1
Tlr3Q99MB1 Gm20553-201ENSMUST00000204205 844 ntBASIC15.67■□□□□ 0.1
Tlr3Q99MB1 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tlr3Q99MB1 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Tlr3Q99MB1 CT030684.1-201ENSMUST00000227292 914 ntBASIC15.67■□□□□ 0.1
Tlr3Q99MB1 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tlr3Q99MB1 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Tlr3Q99MB1 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tlr3Q99MB1 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tlr3Q99MB1 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tlr3Q99MB1 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Tlr3Q99MB1 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tlr3Q99MB1 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC15.67■□□□□ 0.1
Tlr3Q99MB1 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Tlr3Q99MB1 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC15.67■□□□□ 0.1
Tlr3Q99MB1 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Tlr3Q99MB1 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Tlr3Q99MB1 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tlr3Q99MB1 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Tlr3Q99MB1 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Tlr3Q99MB1 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tlr3Q99MB1 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Tlr3Q99MB1 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
Tlr3Q99MB1 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Tlr3Q99MB1 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC15.66■□□□□ 0.1
Tlr3Q99MB1 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tlr3Q99MB1 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tlr3Q99MB1 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tlr3Q99MB1 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tlr3Q99MB1 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tlr3Q99MB1 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC15.66■□□□□ 0.1
Tlr3Q99MB1 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Tlr3Q99MB1 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC15.66■□□□□ 0.1
Tlr3Q99MB1 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Tlr3Q99MB1 AC139382.1-201ENSMUST00000221402 498 ntBASIC15.66■□□□□ 0.1
Tlr3Q99MB1 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tlr3Q99MB1 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Tlr3Q99MB1 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tlr3Q99MB1 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Tlr3Q99MB1 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tlr3Q99MB1 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC15.66■□□□□ 0.1
Tlr3Q99MB1 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tlr3Q99MB1 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tlr3Q99MB1 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
Tlr3Q99MB1 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tlr3Q99MB1 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Tlr3Q99MB1 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Tlr3Q99MB1 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tlr3Q99MB1 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tlr3Q99MB1 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tlr3Q99MB1 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Tlr3Q99MB1 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tlr3Q99MB1 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tlr3Q99MB1 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tlr3Q99MB1 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Tlr3Q99MB1 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Tlr3Q99MB1 Gpr146-202ENSMUST00000053120 1040 ntBASIC15.65■□□□□ 0.1
Tlr3Q99MB1 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tlr3Q99MB1 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tlr3Q99MB1 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Tlr3Q99MB1 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
Tlr3Q99MB1 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tlr3Q99MB1 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Tlr3Q99MB1 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tlr3Q99MB1 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tlr3Q99MB1 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Tlr3Q99MB1 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tlr3Q99MB1 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms