Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Tcf21-202ENSMUST00000218002 1788 ntBASIC13.67□□□□□ -0.22
Nkx6-1Q99MA9 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Nkx6-1Q99MA9 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx6-1Q99MA9 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Nkx6-1Q99MA9 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx6-1Q99MA9 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx6-1Q99MA9 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx6-1Q99MA9 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx6-1Q99MA9 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx6-1Q99MA9 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx6-1Q99MA9 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx6-1Q99MA9 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx6-1Q99MA9 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx6-1Q99MA9 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx6-1Q99MA9 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx6-1Q99MA9 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx6-1Q99MA9 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx6-1Q99MA9 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx6-1Q99MA9 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx6-1Q99MA9 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
Nkx6-1Q99MA9 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx6-1Q99MA9 Gm43072-201ENSMUST00000200283 1671 ntBASIC13.66□□□□□ -0.22
Nkx6-1Q99MA9 Gm8242-201ENSMUST00000193029 1420 ntBASIC13.66□□□□□ -0.22
Nkx6-1Q99MA9 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx6-1Q99MA9 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx6-1Q99MA9 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx6-1Q99MA9 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Nkx6-1Q99MA9 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC13.66□□□□□ -0.22
Nkx6-1Q99MA9 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx6-1Q99MA9 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx6-1Q99MA9 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC13.66□□□□□ -0.22
Nkx6-1Q99MA9 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC13.66□□□□□ -0.22
Nkx6-1Q99MA9 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx6-1Q99MA9 AC121804.3-201ENSMUST00000223420 295 ntBASIC13.66□□□□□ -0.22
Nkx6-1Q99MA9 AC154532.1-201ENSMUST00000227860 965 ntBASIC13.66□□□□□ -0.22
Nkx6-1Q99MA9 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx6-1Q99MA9 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC13.66□□□□□ -0.22
Nkx6-1Q99MA9 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx6-1Q99MA9 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx6-1Q99MA9 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx6-1Q99MA9 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx6-1Q99MA9 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx6-1Q99MA9 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx6-1Q99MA9 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx6-1Q99MA9 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx6-1Q99MA9 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx6-1Q99MA9 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx6-1Q99MA9 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx6-1Q99MA9 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Nkx6-1Q99MA9 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx6-1Q99MA9 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx6-1Q99MA9 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx6-1Q99MA9 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC13.65□□□□□ -0.22
Nkx6-1Q99MA9 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC13.65□□□□□ -0.22
Nkx6-1Q99MA9 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx6-1Q99MA9 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC13.65□□□□□ -0.22
Nkx6-1Q99MA9 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.65□□□□□ -0.22
Nkx6-1Q99MA9 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC13.65□□□□□ -0.22
Nkx6-1Q99MA9 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Nkx6-1Q99MA9 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC13.65□□□□□ -0.22
Nkx6-1Q99MA9 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC13.65□□□□□ -0.22
Nkx6-1Q99MA9 AC166349.1-201ENSMUST00000220866 695 ntBASIC13.65□□□□□ -0.22
Nkx6-1Q99MA9 AC154846.1-201ENSMUST00000226278 862 ntBASIC13.65□□□□□ -0.22
Nkx6-1Q99MA9 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx6-1Q99MA9 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx6-1Q99MA9 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx6-1Q99MA9 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx6-1Q99MA9 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx6-1Q99MA9 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC13.65□□□□□ -0.22
Nkx6-1Q99MA9 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx6-1Q99MA9 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx6-1Q99MA9 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx6-1Q99MA9 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx6-1Q99MA9 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx6-1Q99MA9 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx6-1Q99MA9 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Nkx6-1Q99MA9 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx6-1Q99MA9 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.23
Nkx6-1Q99MA9 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Nkx6-1Q99MA9 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
Nkx6-1Q99MA9 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx6-1Q99MA9 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC13.64□□□□□ -0.23
Nkx6-1Q99MA9 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx6-1Q99MA9 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx6-1Q99MA9 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx6-1Q99MA9 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx6-1Q99MA9 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx6-1Q99MA9 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx6-1Q99MA9 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx6-1Q99MA9 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Nkx6-1Q99MA9 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx6-1Q99MA9 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx6-1Q99MA9 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx6-1Q99MA9 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Nkx6-1Q99MA9 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx6-1Q99MA9 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx6-1Q99MA9 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Nkx6-1Q99MA9 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC13.64□□□□□ -0.23
Nkx6-1Q99MA9 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx6-1Q99MA9 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms