Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Gm2451-201ENSMUST00000199447 999 ntBASIC16.79■□□□□ 0.28
Rfc4Q99J62 Gm10290-201ENSMUST00000200451 999 ntBASIC16.79■□□□□ 0.28
Rfc4Q99J62 AC149294.4-201ENSMUST00000227870 882 ntBASIC16.79■□□□□ 0.28
Rfc4Q99J62 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rfc4Q99J62 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Rfc4Q99J62 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rfc4Q99J62 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rfc4Q99J62 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rfc4Q99J62 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rfc4Q99J62 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rfc4Q99J62 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rfc4Q99J62 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rfc4Q99J62 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Rfc4Q99J62 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
Rfc4Q99J62 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC16.78■□□□□ 0.28
Rfc4Q99J62 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rfc4Q99J62 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC16.78■□□□□ 0.28
Rfc4Q99J62 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Rfc4Q99J62 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rfc4Q99J62 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rfc4Q99J62 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rfc4Q99J62 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rfc4Q99J62 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rfc4Q99J62 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC16.78■□□□□ 0.28
Rfc4Q99J62 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rfc4Q99J62 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rfc4Q99J62 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rfc4Q99J62 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rfc4Q99J62 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rfc4Q99J62 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rfc4Q99J62 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rfc4Q99J62 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rfc4Q99J62 Gm10313-201ENSMUST00000095320 1002 ntBASIC16.78■□□□□ 0.28
Rfc4Q99J62 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rfc4Q99J62 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rfc4Q99J62 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Rfc4Q99J62 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rfc4Q99J62 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rfc4Q99J62 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rfc4Q99J62 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rfc4Q99J62 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Rfc4Q99J62 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Rfc4Q99J62 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Rfc4Q99J62 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Rfc4Q99J62 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rfc4Q99J62 Gm5049-201ENSMUST00000195878 1590 ntBASIC16.77■□□□□ 0.28
Rfc4Q99J62 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rfc4Q99J62 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rfc4Q99J62 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rfc4Q99J62 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rfc4Q99J62 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rfc4Q99J62 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC16.77■□□□□ 0.28
Rfc4Q99J62 Trav13-3-201ENSMUST00000117226 336 ntBASIC16.77■□□□□ 0.28
Rfc4Q99J62 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC16.77■□□□□ 0.28
Rfc4Q99J62 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rfc4Q99J62 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rfc4Q99J62 Gm9182-201ENSMUST00000217829 639 ntBASIC16.77■□□□□ 0.28
Rfc4Q99J62 Gm9797-201ENSMUST00000052902 613 ntBASIC16.77■□□□□ 0.28
Rfc4Q99J62 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Rfc4Q99J62 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Rfc4Q99J62 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Rfc4Q99J62 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rfc4Q99J62 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rfc4Q99J62 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rfc4Q99J62 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rfc4Q99J62 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Rfc4Q99J62 Gm43352-201ENSMUST00000196419 3065 ntBASIC16.76■□□□□ 0.27
Rfc4Q99J62 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rfc4Q99J62 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rfc4Q99J62 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rfc4Q99J62 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Rfc4Q99J62 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rfc4Q99J62 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC16.76■□□□□ 0.27
Rfc4Q99J62 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rfc4Q99J62 Gm28760-201ENSMUST00000185995 736 ntBASIC16.76■□□□□ 0.27
Rfc4Q99J62 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC16.76■□□□□ 0.27
Rfc4Q99J62 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rfc4Q99J62 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rfc4Q99J62 AC156016.3-201ENSMUST00000228623 344 ntBASIC16.76■□□□□ 0.27
Rfc4Q99J62 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rfc4Q99J62 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Rfc4Q99J62 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rfc4Q99J62 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rfc4Q99J62 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rfc4Q99J62 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rfc4Q99J62 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rfc4Q99J62 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Rfc4Q99J62 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rfc4Q99J62 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Rfc4Q99J62 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Rfc4Q99J62 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rfc4Q99J62 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rfc4Q99J62 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rfc4Q99J62 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rfc4Q99J62 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rfc4Q99J62 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rfc4Q99J62 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rfc4Q99J62 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rfc4Q99J62 Gm8749-201ENSMUST00000117737 331 ntBASIC16.75■□□□□ 0.27
Rfc4Q99J62 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms