Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb3Q91XZ7 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb3Q91XZ7 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb3Q91XZ7 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb3Q91XZ7 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.65□□□□□ -0.06
Pcdhb3Q91XZ7 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb3Q91XZ7 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Pcdhb3Q91XZ7 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb3Q91XZ7 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb3Q91XZ7 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb3Q91XZ7 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb3Q91XZ7 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb3Q91XZ7 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb3Q91XZ7 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb3Q91XZ7 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.06
Pcdhb3Q91XZ7 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb3Q91XZ7 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC14.65□□□□□ -0.06
Pcdhb3Q91XZ7 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb3Q91XZ7 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb3Q91XZ7 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb3Q91XZ7 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Pcdhb3Q91XZ7 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb3Q91XZ7 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb3Q91XZ7 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb3Q91XZ7 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.64□□□□□ -0.07
Pcdhb3Q91XZ7 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb3Q91XZ7 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Pcdhb3Q91XZ7 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb3Q91XZ7 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb3Q91XZ7 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb3Q91XZ7 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb3Q91XZ7 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC14.64□□□□□ -0.07
Pcdhb3Q91XZ7 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Pcdhb3Q91XZ7 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb3Q91XZ7 Gm18733-201ENSMUST00000173950 856 ntBASIC14.64□□□□□ -0.07
Pcdhb3Q91XZ7 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC14.64□□□□□ -0.07
Pcdhb3Q91XZ7 Gm6443-201ENSMUST00000203599 874 ntBASIC14.64□□□□□ -0.07
Pcdhb3Q91XZ7 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.64□□□□□ -0.07
Pcdhb3Q91XZ7 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb3Q91XZ7 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb3Q91XZ7 Prr9-201ENSMUST00000070284 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb3Q91XZ7 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Pcdhb3Q91XZ7 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Pcdhb3Q91XZ7 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC14.64□□□□□ -0.07
Pcdhb3Q91XZ7 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Pcdhb3Q91XZ7 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb3Q91XZ7 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Pcdhb3Q91XZ7 Gm37644-201ENSMUST00000192190 2270 ntBASIC14.64□□□□□ -0.07
Pcdhb3Q91XZ7 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb3Q91XZ7 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb3Q91XZ7 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb3Q91XZ7 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb3Q91XZ7 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb3Q91XZ7 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb3Q91XZ7 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb3Q91XZ7 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb3Q91XZ7 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Pcdhb3Q91XZ7 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb3Q91XZ7 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Pcdhb3Q91XZ7 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb3Q91XZ7 Grk6-205ENSMUST00000224653 2976 ntBASIC14.63□□□□□ -0.07
Pcdhb3Q91XZ7 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb3Q91XZ7 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Pcdhb3Q91XZ7 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb3Q91XZ7 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb3Q91XZ7 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb3Q91XZ7 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC14.63□□□□□ -0.07
Pcdhb3Q91XZ7 Meig1-202ENSMUST00000115081 421 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Pcdhb3Q91XZ7 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb3Q91XZ7 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb3Q91XZ7 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb3Q91XZ7 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb3Q91XZ7 Gm43514-201ENSMUST00000198852 424 ntBASIC14.63□□□□□ -0.07
Pcdhb3Q91XZ7 Gm9449-201ENSMUST00000207265 1011 ntBASIC14.63□□□□□ -0.07
Pcdhb3Q91XZ7 Gm45878-201ENSMUST00000211839 241 ntBASIC14.63□□□□□ -0.07
Pcdhb3Q91XZ7 AC161829.1-201ENSMUST00000220298 281 ntBASIC14.63□□□□□ -0.07
Pcdhb3Q91XZ7 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb3Q91XZ7 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb3Q91XZ7 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb3Q91XZ7 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb3Q91XZ7 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.63□□□□□ -0.07
Pcdhb3Q91XZ7 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
Pcdhb3Q91XZ7 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
Pcdhb3Q91XZ7 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb3Q91XZ7 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.63□□□□□ -0.07
Pcdhb3Q91XZ7 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb3Q91XZ7 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb3Q91XZ7 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb3Q91XZ7 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC14.63□□□□□ -0.07
Pcdhb3Q91XZ7 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb3Q91XZ7 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb3Q91XZ7 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb3Q91XZ7 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb3Q91XZ7 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
Pcdhb3Q91XZ7 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb3Q91XZ7 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb3Q91XZ7 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb3Q91XZ7 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb3Q91XZ7 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb3Q91XZ7 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.62□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms