Protein–RNA interactions for Protein: Q91VR5

Ddx1, ATP-dependent RNA helicase DDX1, mousemouse

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx1Q91VR5 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ddx1Q91VR5 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ddx1Q91VR5 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Ddx1Q91VR5 Gm4081-201ENSMUST00000195287 1838 ntBASIC15.08■□□□□ 0.01
Ddx1Q91VR5 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ddx1Q91VR5 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ddx1Q91VR5 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ddx1Q91VR5 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ddx1Q91VR5 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Ddx1Q91VR5 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC15.08■□□□□ 0
Ddx1Q91VR5 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
Ddx1Q91VR5 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ddx1Q91VR5 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ddx1Q91VR5 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Ddx1Q91VR5 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Ddx1Q91VR5 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Ddx1Q91VR5 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ddx1Q91VR5 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC15.08■□□□□ 0
Ddx1Q91VR5 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ddx1Q91VR5 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Ddx1Q91VR5 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC15.08■□□□□ 0
Ddx1Q91VR5 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ddx1Q91VR5 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ddx1Q91VR5 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Ddx1Q91VR5 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ddx1Q91VR5 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ddx1Q91VR5 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Ddx1Q91VR5 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ddx1Q91VR5 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Ddx1Q91VR5 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
Ddx1Q91VR5 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC15.08■□□□□ 0
Ddx1Q91VR5 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
Ddx1Q91VR5 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Ddx1Q91VR5 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ddx1Q91VR5 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ddx1Q91VR5 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
Ddx1Q91VR5 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC15.07■□□□□ 0
Ddx1Q91VR5 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Ddx1Q91VR5 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC15.07■□□□□ 0
Ddx1Q91VR5 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ddx1Q91VR5 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ddx1Q91VR5 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Ddx1Q91VR5 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Ddx1Q91VR5 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ddx1Q91VR5 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ddx1Q91VR5 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ddx1Q91VR5 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Ddx1Q91VR5 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ddx1Q91VR5 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ddx1Q91VR5 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ddx1Q91VR5 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ddx1Q91VR5 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC15.07■□□□□ 0
Ddx1Q91VR5 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ddx1Q91VR5 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC15.07■□□□□ 0
Ddx1Q91VR5 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ddx1Q91VR5 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ddx1Q91VR5 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC15.07■□□□□ 0
Ddx1Q91VR5 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC15.07■□□□□ 0
Ddx1Q91VR5 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ddx1Q91VR5 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ddx1Q91VR5 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Ddx1Q91VR5 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Ddx1Q91VR5 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ddx1Q91VR5 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ddx1Q91VR5 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Ddx1Q91VR5 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Ddx1Q91VR5 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Ddx1Q91VR5 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Ddx1Q91VR5 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ddx1Q91VR5 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Ddx1Q91VR5 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC15.07■□□□□ 0
Ddx1Q91VR5 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ddx1Q91VR5 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Ddx1Q91VR5 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Ddx1Q91VR5 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ddx1Q91VR5 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Ddx1Q91VR5 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ddx1Q91VR5 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ddx1Q91VR5 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ddx1Q91VR5 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ddx1Q91VR5 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Ddx1Q91VR5 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC15.06■□□□□ 0
Ddx1Q91VR5 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ddx1Q91VR5 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ddx1Q91VR5 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Ddx1Q91VR5 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ddx1Q91VR5 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Ddx1Q91VR5 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Ddx1Q91VR5 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ddx1Q91VR5 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ddx1Q91VR5 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC15.06■□□□□ 0
Ddx1Q91VR5 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC15.06■□□□□ 0
Ddx1Q91VR5 Gm6226-201ENSMUST00000117765 1146 ntBASIC15.06■□□□□ 0
Ddx1Q91VR5 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC15.06■□□□□ 0
Ddx1Q91VR5 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC15.06■□□□□ 0
Ddx1Q91VR5 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC15.06■□□□□ 0
Ddx1Q91VR5 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC15.06■□□□□ 0
Ddx1Q91VR5 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Ddx1Q91VR5 Gm24158-201ENSMUST00000175263 71 ntBASIC15.06■□□□□ 0
Ddx1Q91VR5 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms