Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tram1Q91V04 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tram1Q91V04 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
Tram1Q91V04 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tram1Q91V04 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tram1Q91V04 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tram1Q91V04 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tram1Q91V04 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tram1Q91V04 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tram1Q91V04 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC12.57□□□□□ -0.4
Tram1Q91V04 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Tram1Q91V04 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC12.57□□□□□ -0.4
Tram1Q91V04 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tram1Q91V04 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Tram1Q91V04 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC12.57□□□□□ -0.4
Tram1Q91V04 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Tram1Q91V04 Gm4459-201ENSMUST00000118750 468 ntBASIC12.57□□□□□ -0.4
Tram1Q91V04 Gm15794-201ENSMUST00000120182 631 ntBASIC12.57□□□□□ -0.4
Tram1Q91V04 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC12.57□□□□□ -0.4
Tram1Q91V04 Gm10499-201ENSMUST00000174094 934 ntBASIC12.57□□□□□ -0.4
Tram1Q91V04 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC12.57□□□□□ -0.4
Tram1Q91V04 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Tram1Q91V04 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tram1Q91V04 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC12.57□□□□□ -0.4
Tram1Q91V04 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tram1Q91V04 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.57□□□□□ -0.4
Tram1Q91V04 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tram1Q91V04 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Tram1Q91V04 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Tram1Q91V04 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tram1Q91V04 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tram1Q91V04 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Tram1Q91V04 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tram1Q91V04 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tram1Q91V04 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tram1Q91V04 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Tram1Q91V04 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tram1Q91V04 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tram1Q91V04 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC12.57□□□□□ -0.4
Tram1Q91V04 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tram1Q91V04 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.56□□□□□ -0.4
Tram1Q91V04 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tram1Q91V04 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Tram1Q91V04 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Tram1Q91V04 Gm42872-201ENSMUST00000200026 1967 ntBASIC12.56□□□□□ -0.4
Tram1Q91V04 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tram1Q91V04 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tram1Q91V04 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tram1Q91V04 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tram1Q91V04 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tram1Q91V04 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tram1Q91V04 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tram1Q91V04 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Tram1Q91V04 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tram1Q91V04 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tram1Q91V04 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Tram1Q91V04 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC12.56□□□□□ -0.4
Tram1Q91V04 Gm25745-201ENSMUST00000174945 133 ntBASIC12.56□□□□□ -0.4
Tram1Q91V04 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC12.56□□□□□ -0.4
Tram1Q91V04 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC12.56□□□□□ -0.4
Tram1Q91V04 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tram1Q91V04 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC12.56□□□□□ -0.4
Tram1Q91V04 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tram1Q91V04 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Tram1Q91V04 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC12.56□□□□□ -0.4
Tram1Q91V04 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tram1Q91V04 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tram1Q91V04 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tram1Q91V04 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.56□□□□□ -0.4
Tram1Q91V04 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
Tram1Q91V04 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tram1Q91V04 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tram1Q91V04 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tram1Q91V04 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tram1Q91V04 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tram1Q91V04 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Tram1Q91V04 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Tram1Q91V04 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tram1Q91V04 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tram1Q91V04 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Tram1Q91V04 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.55□□□□□ -0.4
Tram1Q91V04 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tram1Q91V04 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Tram1Q91V04 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tram1Q91V04 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tram1Q91V04 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tram1Q91V04 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tram1Q91V04 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Tram1Q91V04 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tram1Q91V04 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tram1Q91V04 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Tram1Q91V04 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC12.55□□□□□ -0.4
Tram1Q91V04 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Tram1Q91V04 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC12.55□□□□□ -0.4
Tram1Q91V04 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC12.55□□□□□ -0.4
Tram1Q91V04 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tram1Q91V04 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Tram1Q91V04 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Tram1Q91V04 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC12.55□□□□□ -0.4
Tram1Q91V04 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms