Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
TraipQ8VIG6 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC15.52■□□□□ 0.07
TraipQ8VIG6 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
TraipQ8VIG6 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
TraipQ8VIG6 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TraipQ8VIG6 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TraipQ8VIG6 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC15.52■□□□□ 0.07
TraipQ8VIG6 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TraipQ8VIG6 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TraipQ8VIG6 Gm14780-201ENSMUST00000118387 2737 ntBASIC15.52■□□□□ 0.07
TraipQ8VIG6 Rab3c-202ENSMUST00000223922 2398 ntBASIC15.51■□□□□ 0.07
TraipQ8VIG6 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TraipQ8VIG6 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TraipQ8VIG6 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TraipQ8VIG6 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC15.51■□□□□ 0.07
TraipQ8VIG6 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TraipQ8VIG6 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TraipQ8VIG6 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TraipQ8VIG6 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TraipQ8VIG6 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
TraipQ8VIG6 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TraipQ8VIG6 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TraipQ8VIG6 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TraipQ8VIG6 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TraipQ8VIG6 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TraipQ8VIG6 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TraipQ8VIG6 Gm15321-201ENSMUST00000121290 288 ntBASIC15.51■□□□□ 0.07
TraipQ8VIG6 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TraipQ8VIG6 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TraipQ8VIG6 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC15.51■□□□□ 0.07
TraipQ8VIG6 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TraipQ8VIG6 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TraipQ8VIG6 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TraipQ8VIG6 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TraipQ8VIG6 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TraipQ8VIG6 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TraipQ8VIG6 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TraipQ8VIG6 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TraipQ8VIG6 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TraipQ8VIG6 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TraipQ8VIG6 Gm29151-201ENSMUST00000196669 2513 ntTSL 5 BASIC15.51■□□□□ 0.07
TraipQ8VIG6 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TraipQ8VIG6 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TraipQ8VIG6 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
TraipQ8VIG6 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TraipQ8VIG6 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TraipQ8VIG6 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TraipQ8VIG6 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TraipQ8VIG6 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TraipQ8VIG6 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
TraipQ8VIG6 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TraipQ8VIG6 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TraipQ8VIG6 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TraipQ8VIG6 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
TraipQ8VIG6 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
TraipQ8VIG6 Gm5763-201ENSMUST00000155951 1530 ntBASIC15.5■□□□□ 0.07
TraipQ8VIG6 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC15.5■□□□□ 0.07
TraipQ8VIG6 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TraipQ8VIG6 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TraipQ8VIG6 Gm4204-201ENSMUST00000110798 1231 ntBASIC15.5■□□□□ 0.07
TraipQ8VIG6 Gm7488-201ENSMUST00000117148 684 ntBASIC15.5■□□□□ 0.07
TraipQ8VIG6 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TraipQ8VIG6 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC15.5■□□□□ 0.07
TraipQ8VIG6 Cd63-ps-201ENSMUST00000145417 875 ntBASIC15.5■□□□□ 0.07
TraipQ8VIG6 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TraipQ8VIG6 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC15.5■□□□□ 0.07
TraipQ8VIG6 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC15.5■□□□□ 0.07
TraipQ8VIG6 Mir125a-201ENSMUST00000083545 68 ntBASIC15.5■□□□□ 0.07
TraipQ8VIG6 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TraipQ8VIG6 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
TraipQ8VIG6 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TraipQ8VIG6 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
TraipQ8VIG6 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
TraipQ8VIG6 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TraipQ8VIG6 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
TraipQ8VIG6 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TraipQ8VIG6 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TraipQ8VIG6 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TraipQ8VIG6 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TraipQ8VIG6 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TraipQ8VIG6 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC15.49■□□□□ 0.07
TraipQ8VIG6 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TraipQ8VIG6 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TraipQ8VIG6 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TraipQ8VIG6 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TraipQ8VIG6 Gm3365-201ENSMUST00000216296 1480 ntBASIC15.49■□□□□ 0.07
TraipQ8VIG6 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TraipQ8VIG6 Gm12882-201ENSMUST00000121696 517 ntBASIC15.49■□□□□ 0.07
TraipQ8VIG6 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC15.49■□□□□ 0.07
TraipQ8VIG6 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TraipQ8VIG6 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC15.49■□□□□ 0.07
TraipQ8VIG6 Gm45925-201ENSMUST00000218882 744 ntBASIC15.49■□□□□ 0.07
TraipQ8VIG6 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TraipQ8VIG6 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TraipQ8VIG6 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TraipQ8VIG6 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TraipQ8VIG6 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TraipQ8VIG6 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
TraipQ8VIG6 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TraipQ8VIG6 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms