Protein–RNA interactions for Protein: Q8VE28

Nkd2, Protein naked cuticle homolog 2, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd2Q8VE28 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nkd2Q8VE28 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nkd2Q8VE28 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nkd2Q8VE28 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkd2Q8VE28 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nkd2Q8VE28 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkd2Q8VE28 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkd2Q8VE28 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC13.34□□□□□ -0.27
Nkd2Q8VE28 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkd2Q8VE28 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.34□□□□□ -0.27
Nkd2Q8VE28 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkd2Q8VE28 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC13.34□□□□□ -0.27
Nkd2Q8VE28 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkd2Q8VE28 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Nkd2Q8VE28 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkd2Q8VE28 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC13.34□□□□□ -0.27
Nkd2Q8VE28 AC139382.1-201ENSMUST00000221402 498 ntBASIC13.34□□□□□ -0.27
Nkd2Q8VE28 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Nkd2Q8VE28 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nkd2Q8VE28 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkd2Q8VE28 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkd2Q8VE28 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nkd2Q8VE28 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkd2Q8VE28 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkd2Q8VE28 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkd2Q8VE28 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Nkd2Q8VE28 AC119177.1-201ENSMUST00000227647 1332 ntBASIC13.34□□□□□ -0.27
Nkd2Q8VE28 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkd2Q8VE28 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkd2Q8VE28 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkd2Q8VE28 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkd2Q8VE28 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkd2Q8VE28 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkd2Q8VE28 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Nkd2Q8VE28 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nkd2Q8VE28 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Nkd2Q8VE28 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nkd2Q8VE28 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nkd2Q8VE28 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nkd2Q8VE28 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nkd2Q8VE28 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nkd2Q8VE28 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nkd2Q8VE28 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Nkd2Q8VE28 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC13.33□□□□□ -0.28
Nkd2Q8VE28 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nkd2Q8VE28 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Nkd2Q8VE28 Gm12892-201ENSMUST00000117367 1146 ntBASIC13.33□□□□□ -0.28
Nkd2Q8VE28 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC13.33□□□□□ -0.28
Nkd2Q8VE28 Rprl2-201ENSMUST00000157150 290 ntBASIC13.33□□□□□ -0.28
Nkd2Q8VE28 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC13.33□□□□□ -0.28
Nkd2Q8VE28 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
Nkd2Q8VE28 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nkd2Q8VE28 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nkd2Q8VE28 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nkd2Q8VE28 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Nkd2Q8VE28 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nkd2Q8VE28 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Nkd2Q8VE28 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nkd2Q8VE28 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nkd2Q8VE28 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Nkd2Q8VE28 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nkd2Q8VE28 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nkd2Q8VE28 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nkd2Q8VE28 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nkd2Q8VE28 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nkd2Q8VE28 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Nkd2Q8VE28 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.28
Nkd2Q8VE28 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nkd2Q8VE28 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nkd2Q8VE28 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nkd2Q8VE28 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC13.32□□□□□ -0.28
Nkd2Q8VE28 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nkd2Q8VE28 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nkd2Q8VE28 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.32□□□□□ -0.28
Nkd2Q8VE28 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nkd2Q8VE28 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nkd2Q8VE28 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nkd2Q8VE28 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nkd2Q8VE28 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nkd2Q8VE28 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nkd2Q8VE28 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nkd2Q8VE28 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nkd2Q8VE28 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nkd2Q8VE28 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC13.32□□□□□ -0.28
Nkd2Q8VE28 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nkd2Q8VE28 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC13.32□□□□□ -0.28
Nkd2Q8VE28 AA543401-201ENSMUST00000164248 1269 ntBASIC13.32□□□□□ -0.28
Nkd2Q8VE28 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nkd2Q8VE28 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC13.32□□□□□ -0.28
Nkd2Q8VE28 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nkd2Q8VE28 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nkd2Q8VE28 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC13.32□□□□□ -0.28
Nkd2Q8VE28 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
Nkd2Q8VE28 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nkd2Q8VE28 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC13.32□□□□□ -0.28
Nkd2Q8VE28 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nkd2Q8VE28 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nkd2Q8VE28 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Nkd2Q8VE28 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Nkd2Q8VE28 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms