Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ddx39aQ8VDW0 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC16.21■□□□□ 0.19
Ddx39aQ8VDW0 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC16.21■□□□□ 0.19
Ddx39aQ8VDW0 Gm6222-201ENSMUST00000120787 396 ntBASIC16.21■□□□□ 0.19
Ddx39aQ8VDW0 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC16.21■□□□□ 0.19
Ddx39aQ8VDW0 Gm5866-201ENSMUST00000177881 973 ntBASIC16.21■□□□□ 0.19
Ddx39aQ8VDW0 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC16.21■□□□□ 0.19
Ddx39aQ8VDW0 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ddx39aQ8VDW0 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ddx39aQ8VDW0 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ddx39aQ8VDW0 Shd-206ENSMUST00000225145 998 ntBASIC16.21■□□□□ 0.19
Ddx39aQ8VDW0 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ddx39aQ8VDW0 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ddx39aQ8VDW0 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ddx39aQ8VDW0 Asic1-205ENSMUST00000228185 1818 ntBASIC16.21■□□□□ 0.19
Ddx39aQ8VDW0 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ddx39aQ8VDW0 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ddx39aQ8VDW0 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ddx39aQ8VDW0 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
Ddx39aQ8VDW0 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Ddx39aQ8VDW0 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Ddx39aQ8VDW0 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Ddx39aQ8VDW0 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
Ddx39aQ8VDW0 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ddx39aQ8VDW0 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ddx39aQ8VDW0 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ddx39aQ8VDW0 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ddx39aQ8VDW0 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ddx39aQ8VDW0 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ddx39aQ8VDW0 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ddx39aQ8VDW0 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC16.2■□□□□ 0.18
Ddx39aQ8VDW0 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ddx39aQ8VDW0 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ddx39aQ8VDW0 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ddx39aQ8VDW0 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ddx39aQ8VDW0 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC16.2■□□□□ 0.18
Ddx39aQ8VDW0 Olfr286-202ENSMUST00000205305 969 ntBASIC16.2■□□□□ 0.18
Ddx39aQ8VDW0 Gm7775-201ENSMUST00000218871 853 ntBASIC16.2■□□□□ 0.18
Ddx39aQ8VDW0 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Ddx39aQ8VDW0 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ddx39aQ8VDW0 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ddx39aQ8VDW0 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ddx39aQ8VDW0 Gm2423-201ENSMUST00000074863 733 ntBASIC16.2■□□□□ 0.18
Ddx39aQ8VDW0 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Ddx39aQ8VDW0 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ddx39aQ8VDW0 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ddx39aQ8VDW0 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ddx39aQ8VDW0 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Ddx39aQ8VDW0 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC16.2■□□□□ 0.18
Ddx39aQ8VDW0 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ddx39aQ8VDW0 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx39aQ8VDW0 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC16.19■□□□□ 0.18
Ddx39aQ8VDW0 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx39aQ8VDW0 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx39aQ8VDW0 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx39aQ8VDW0 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Ddx39aQ8VDW0 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx39aQ8VDW0 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
Ddx39aQ8VDW0 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx39aQ8VDW0 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx39aQ8VDW0 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx39aQ8VDW0 Gm15487-201ENSMUST00000122373 465 ntBASIC16.19■□□□□ 0.18
Ddx39aQ8VDW0 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC16.19■□□□□ 0.18
Ddx39aQ8VDW0 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx39aQ8VDW0 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx39aQ8VDW0 Gm27680-201ENSMUST00000184192 160 ntBASIC16.19■□□□□ 0.18
Ddx39aQ8VDW0 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Ddx39aQ8VDW0 Gm37230-201ENSMUST00000194491 818 ntBASIC16.19■□□□□ 0.18
Ddx39aQ8VDW0 Gm9182-201ENSMUST00000217829 639 ntBASIC16.19■□□□□ 0.18
Ddx39aQ8VDW0 AC149588.3-201ENSMUST00000227515 150 ntBASIC16.19■□□□□ 0.18
Ddx39aQ8VDW0 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Ddx39aQ8VDW0 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx39aQ8VDW0 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC16.19■□□□□ 0.18
Ddx39aQ8VDW0 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx39aQ8VDW0 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx39aQ8VDW0 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx39aQ8VDW0 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx39aQ8VDW0 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Ddx39aQ8VDW0 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx39aQ8VDW0 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx39aQ8VDW0 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC16.19■□□□□ 0.18
Ddx39aQ8VDW0 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx39aQ8VDW0 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ddx39aQ8VDW0 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.18■□□□□ 0.18
Ddx39aQ8VDW0 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Ddx39aQ8VDW0 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ddx39aQ8VDW0 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ddx39aQ8VDW0 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Ddx39aQ8VDW0 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC16.18■□□□□ 0.18
Ddx39aQ8VDW0 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC16.18■□□□□ 0.18
Ddx39aQ8VDW0 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ddx39aQ8VDW0 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ddx39aQ8VDW0 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ddx39aQ8VDW0 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC16.18■□□□□ 0.18
Ddx39aQ8VDW0 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ddx39aQ8VDW0 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ddx39aQ8VDW0 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ddx39aQ8VDW0 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ddx39aQ8VDW0 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Ddx39aQ8VDW0 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms