Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rprd1aQ8VDS4 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rprd1aQ8VDS4 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rprd1aQ8VDS4 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rprd1aQ8VDS4 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rprd1aQ8VDS4 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Rprd1aQ8VDS4 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC15.04■□□□□ -0
Rprd1aQ8VDS4 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Rprd1aQ8VDS4 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rprd1aQ8VDS4 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rprd1aQ8VDS4 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rprd1aQ8VDS4 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC15.04■□□□□ -0
Rprd1aQ8VDS4 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rprd1aQ8VDS4 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC15.04■□□□□ -0
Rprd1aQ8VDS4 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC15.04■□□□□ -0
Rprd1aQ8VDS4 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rprd1aQ8VDS4 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC15.04■□□□□ -0
Rprd1aQ8VDS4 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rprd1aQ8VDS4 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rprd1aQ8VDS4 Gm38225-201ENSMUST00000194001 393 ntBASIC15.04■□□□□ -0
Rprd1aQ8VDS4 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC15.04■□□□□ -0
Rprd1aQ8VDS4 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC15.04■□□□□ -0
Rprd1aQ8VDS4 AC131710.1-201ENSMUST00000228336 990 ntBASIC15.04■□□□□ -0
Rprd1aQ8VDS4 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rprd1aQ8VDS4 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rprd1aQ8VDS4 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC15.04■□□□□ -0
Rprd1aQ8VDS4 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Rprd1aQ8VDS4 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rprd1aQ8VDS4 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rprd1aQ8VDS4 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rprd1aQ8VDS4 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rprd1aQ8VDS4 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC15.03■□□□□ -0
Rprd1aQ8VDS4 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC15.03■□□□□ -0
Rprd1aQ8VDS4 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rprd1aQ8VDS4 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rprd1aQ8VDS4 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Rprd1aQ8VDS4 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rprd1aQ8VDS4 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rprd1aQ8VDS4 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rprd1aQ8VDS4 Gm13034-201ENSMUST00000121342 3177 ntBASIC15.03■□□□□ -0
Rprd1aQ8VDS4 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rprd1aQ8VDS4 Gm42934-201ENSMUST00000196920 1345 ntBASIC15.03■□□□□ -0
Rprd1aQ8VDS4 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC15.03■□□□□ -0
Rprd1aQ8VDS4 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC15.03■□□□□ -0
Rprd1aQ8VDS4 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC15.03■□□□□ -0
Rprd1aQ8VDS4 Gm8749-201ENSMUST00000117737 331 ntBASIC15.03■□□□□ -0
Rprd1aQ8VDS4 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC15.03■□□□□ -0
Rprd1aQ8VDS4 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC15.03■□□□□ -0
Rprd1aQ8VDS4 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rprd1aQ8VDS4 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Rprd1aQ8VDS4 Gm9726-201ENSMUST00000180321 678 ntBASIC15.03■□□□□ -0
Rprd1aQ8VDS4 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC15.03■□□□□ -0
Rprd1aQ8VDS4 Gm4691-201ENSMUST00000182339 1000 ntBASIC15.03■□□□□ -0
Rprd1aQ8VDS4 Gm2451-201ENSMUST00000199447 999 ntBASIC15.03■□□□□ -0
Rprd1aQ8VDS4 Gm10290-201ENSMUST00000200451 999 ntBASIC15.03■□□□□ -0
Rprd1aQ8VDS4 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rprd1aQ8VDS4 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC15.03■□□□□ -0
Rprd1aQ8VDS4 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC15.03■□□□□ -0
Rprd1aQ8VDS4 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Rprd1aQ8VDS4 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rprd1aQ8VDS4 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Rprd1aQ8VDS4 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rprd1aQ8VDS4 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rprd1aQ8VDS4 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rprd1aQ8VDS4 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC15.03■□□□□ -0
Rprd1aQ8VDS4 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rprd1aQ8VDS4 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rprd1aQ8VDS4 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rprd1aQ8VDS4 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rprd1aQ8VDS4 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rprd1aQ8VDS4 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Rprd1aQ8VDS4 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC15.02■□□□□ -0
Rprd1aQ8VDS4 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Rprd1aQ8VDS4 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rprd1aQ8VDS4 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Rprd1aQ8VDS4 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC15.02■□□□□ -0
Rprd1aQ8VDS4 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rprd1aQ8VDS4 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC15.02■□□□□ -0
Rprd1aQ8VDS4 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rprd1aQ8VDS4 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rprd1aQ8VDS4 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Rprd1aQ8VDS4 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rprd1aQ8VDS4 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Rprd1aQ8VDS4 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC15.02■□□□□ -0
Rprd1aQ8VDS4 Gm5479-201ENSMUST00000160578 435 ntBASIC15.02■□□□□ -0
Rprd1aQ8VDS4 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rprd1aQ8VDS4 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rprd1aQ8VDS4 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC15.02□□□□□ -0.01
Rprd1aQ8VDS4 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rprd1aQ8VDS4 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC15.02□□□□□ -0.01
Rprd1aQ8VDS4 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC15.02□□□□□ -0.01
Rprd1aQ8VDS4 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rprd1aQ8VDS4 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rprd1aQ8VDS4 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rprd1aQ8VDS4 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rprd1aQ8VDS4 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
Rprd1aQ8VDS4 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC15.02□□□□□ -0.01
Rprd1aQ8VDS4 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Rprd1aQ8VDS4 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Rprd1aQ8VDS4 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms