Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.43■□□□□ 0.22
Syne4Q8CII8 Gm12742-201ENSMUST00000117326 410 ntBASIC16.43■□□□□ 0.22
Syne4Q8CII8 Gm5303-201ENSMUST00000117943 1252 ntBASIC16.43■□□□□ 0.22
Syne4Q8CII8 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC16.43■□□□□ 0.22
Syne4Q8CII8 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC16.43■□□□□ 0.22
Syne4Q8CII8 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Syne4Q8CII8 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Syne4Q8CII8 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC16.43■□□□□ 0.22
Syne4Q8CII8 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Syne4Q8CII8 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC16.43■□□□□ 0.22
Syne4Q8CII8 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Syne4Q8CII8 Gm5356-201ENSMUST00000093326 615 ntBASIC16.43■□□□□ 0.22
Syne4Q8CII8 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC16.43■□□□□ 0.22
Syne4Q8CII8 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Syne4Q8CII8 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Syne4Q8CII8 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC16.43■□□□□ 0.22
Syne4Q8CII8 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Syne4Q8CII8 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Syne4Q8CII8 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Syne4Q8CII8 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Syne4Q8CII8 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Syne4Q8CII8 Prob1-201ENSMUST00000097619 3021 ntBASIC16.43■□□□□ 0.22
Syne4Q8CII8 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Syne4Q8CII8 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Syne4Q8CII8 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Syne4Q8CII8 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Syne4Q8CII8 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Syne4Q8CII8 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Syne4Q8CII8 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.42■□□□□ 0.22
Syne4Q8CII8 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Syne4Q8CII8 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Syne4Q8CII8 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Syne4Q8CII8 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Syne4Q8CII8 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Syne4Q8CII8 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Syne4Q8CII8 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC16.42■□□□□ 0.22
Syne4Q8CII8 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Syne4Q8CII8 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Syne4Q8CII8 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Syne4Q8CII8 Gm7558-201ENSMUST00000193221 1165 ntBASIC16.42■□□□□ 0.22
Syne4Q8CII8 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC16.42■□□□□ 0.22
Syne4Q8CII8 Gm5279-201ENSMUST00000199575 745 ntBASIC16.42■□□□□ 0.22
Syne4Q8CII8 Gm18307-201ENSMUST00000206864 949 ntBASIC16.42■□□□□ 0.22
Syne4Q8CII8 Gm44799-201ENSMUST00000207639 1202 ntBASIC16.42■□□□□ 0.22
Syne4Q8CII8 Gm45841-201ENSMUST00000207700 164 ntBASIC16.42■□□□□ 0.22
Syne4Q8CII8 Gm7446-201ENSMUST00000221035 1240 ntBASIC16.42■□□□□ 0.22
Syne4Q8CII8 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Syne4Q8CII8 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Syne4Q8CII8 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Syne4Q8CII8 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Syne4Q8CII8 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Syne4Q8CII8 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Syne4Q8CII8 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Syne4Q8CII8 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Syne4Q8CII8 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Syne4Q8CII8 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Syne4Q8CII8 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC16.42■□□□□ 0.22
Syne4Q8CII8 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Syne4Q8CII8 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Syne4Q8CII8 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Syne4Q8CII8 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Syne4Q8CII8 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC16.41■□□□□ 0.22
Syne4Q8CII8 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Syne4Q8CII8 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.41■□□□□ 0.22
Syne4Q8CII8 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.41■□□□□ 0.22
Syne4Q8CII8 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Syne4Q8CII8 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Syne4Q8CII8 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Syne4Q8CII8 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Syne4Q8CII8 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Syne4Q8CII8 Gm10275-202ENSMUST00000168697 495 ntBASIC16.41■□□□□ 0.22
Syne4Q8CII8 AC154806.6-201ENSMUST00000228192 202 ntBASIC16.41■□□□□ 0.22
Syne4Q8CII8 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Syne4Q8CII8 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Syne4Q8CII8 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Syne4Q8CII8 Gm10275-201ENSMUST00000092620 635 ntBASIC16.41■□□□□ 0.22
Syne4Q8CII8 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Syne4Q8CII8 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Syne4Q8CII8 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Syne4Q8CII8 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Syne4Q8CII8 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
Syne4Q8CII8 AC131068.2-201ENSMUST00000226175 1453 ntBASIC16.41■□□□□ 0.22
Syne4Q8CII8 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Syne4Q8CII8 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Syne4Q8CII8 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Syne4Q8CII8 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Syne4Q8CII8 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC16.4■□□□□ 0.22
Syne4Q8CII8 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC16.4■□□□□ 0.22
Syne4Q8CII8 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Syne4Q8CII8 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC16.4■□□□□ 0.22
Syne4Q8CII8 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC16.4■□□□□ 0.22
Syne4Q8CII8 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Syne4Q8CII8 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Syne4Q8CII8 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Syne4Q8CII8 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Syne4Q8CII8 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.4■□□□□ 0.22
Syne4Q8CII8 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Syne4Q8CII8 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Syne4Q8CII8 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Syne4Q8CII8 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms