Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.18□□□□□ -0.14
Rdh1Q8CGV4 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Rdh1Q8CGV4 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rdh1Q8CGV4 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC14.18□□□□□ -0.14
Rdh1Q8CGV4 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC14.18□□□□□ -0.14
Rdh1Q8CGV4 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rdh1Q8CGV4 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC14.18□□□□□ -0.14
Rdh1Q8CGV4 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC14.18□□□□□ -0.14
Rdh1Q8CGV4 Gm27306-201ENSMUST00000183970 107 ntBASIC14.18□□□□□ -0.14
Rdh1Q8CGV4 Gm27321-201ENSMUST00000185021 205 ntBASIC14.18□□□□□ -0.14
Rdh1Q8CGV4 Gm7063-201ENSMUST00000186840 981 ntBASIC14.18□□□□□ -0.14
Rdh1Q8CGV4 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rdh1Q8CGV4 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rdh1Q8CGV4 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rdh1Q8CGV4 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rdh1Q8CGV4 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rdh1Q8CGV4 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rdh1Q8CGV4 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rdh1Q8CGV4 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rdh1Q8CGV4 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rdh1Q8CGV4 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rdh1Q8CGV4 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rdh1Q8CGV4 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rdh1Q8CGV4 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Rdh1Q8CGV4 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rdh1Q8CGV4 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rdh1Q8CGV4 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.18□□□□□ -0.14
Rdh1Q8CGV4 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rdh1Q8CGV4 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rdh1Q8CGV4 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rdh1Q8CGV4 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rdh1Q8CGV4 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rdh1Q8CGV4 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rdh1Q8CGV4 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rdh1Q8CGV4 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rdh1Q8CGV4 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rdh1Q8CGV4 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rdh1Q8CGV4 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC14.17□□□□□ -0.14
Rdh1Q8CGV4 Gm27989-201ENSMUST00000184721 107 ntBASIC14.17□□□□□ -0.14
Rdh1Q8CGV4 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC14.17□□□□□ -0.14
Rdh1Q8CGV4 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC14.17□□□□□ -0.14
Rdh1Q8CGV4 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC14.17□□□□□ -0.14
Rdh1Q8CGV4 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rdh1Q8CGV4 AC149588.3-201ENSMUST00000227515 150 ntBASIC14.17□□□□□ -0.14
Rdh1Q8CGV4 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rdh1Q8CGV4 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rdh1Q8CGV4 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rdh1Q8CGV4 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rdh1Q8CGV4 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rdh1Q8CGV4 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rdh1Q8CGV4 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rdh1Q8CGV4 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Rdh1Q8CGV4 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rdh1Q8CGV4 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14.17□□□□□ -0.14
Rdh1Q8CGV4 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rdh1Q8CGV4 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rdh1Q8CGV4 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rdh1Q8CGV4 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rdh1Q8CGV4 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.16□□□□□ -0.14
Rdh1Q8CGV4 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rdh1Q8CGV4 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rdh1Q8CGV4 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rdh1Q8CGV4 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rdh1Q8CGV4 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rdh1Q8CGV4 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rdh1Q8CGV4 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rdh1Q8CGV4 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Rdh1Q8CGV4 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rdh1Q8CGV4 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rdh1Q8CGV4 Gm27631-201ENSMUST00000184163 466 ntBASIC14.16□□□□□ -0.14
Rdh1Q8CGV4 Gm27680-201ENSMUST00000184192 160 ntBASIC14.16□□□□□ -0.14
Rdh1Q8CGV4 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC14.16□□□□□ -0.14
Rdh1Q8CGV4 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC14.16□□□□□ -0.14
Rdh1Q8CGV4 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rdh1Q8CGV4 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rdh1Q8CGV4 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rdh1Q8CGV4 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Rdh1Q8CGV4 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rdh1Q8CGV4 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rdh1Q8CGV4 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rdh1Q8CGV4 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rdh1Q8CGV4 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rdh1Q8CGV4 AC124751.1-201ENSMUST00000222716 1408 ntBASIC14.15□□□□□ -0.14
Rdh1Q8CGV4 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rdh1Q8CGV4 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rdh1Q8CGV4 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rdh1Q8CGV4 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Rdh1Q8CGV4 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rdh1Q8CGV4 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rdh1Q8CGV4 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rdh1Q8CGV4 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rdh1Q8CGV4 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rdh1Q8CGV4 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rdh1Q8CGV4 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rdh1Q8CGV4 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Rdh1Q8CGV4 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC14.15□□□□□ -0.14
Rdh1Q8CGV4 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rdh1Q8CGV4 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rdh1Q8CGV4 Mir8102-201ENSMUST00000184148 139 ntBASIC14.15□□□□□ -0.14
Rdh1Q8CGV4 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms