Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Lrif1Q8CDD9 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC14.46□□□□□ -0.1
Lrif1Q8CDD9 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lrif1Q8CDD9 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Lrif1Q8CDD9 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lrif1Q8CDD9 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lrif1Q8CDD9 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lrif1Q8CDD9 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lrif1Q8CDD9 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lrif1Q8CDD9 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Lrif1Q8CDD9 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lrif1Q8CDD9 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Lrif1Q8CDD9 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lrif1Q8CDD9 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Lrif1Q8CDD9 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lrif1Q8CDD9 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Lrif1Q8CDD9 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.45□□□□□ -0.1
Lrif1Q8CDD9 Mir5126-201ENSMUST00000175513 77 ntBASIC14.45□□□□□ -0.1
Lrif1Q8CDD9 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Lrif1Q8CDD9 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Lrif1Q8CDD9 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Lrif1Q8CDD9 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC14.45□□□□□ -0.1
Lrif1Q8CDD9 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Lrif1Q8CDD9 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC14.45□□□□□ -0.1
Lrif1Q8CDD9 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lrif1Q8CDD9 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lrif1Q8CDD9 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lrif1Q8CDD9 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Lrif1Q8CDD9 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lrif1Q8CDD9 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Lrif1Q8CDD9 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lrif1Q8CDD9 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lrif1Q8CDD9 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Lrif1Q8CDD9 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lrif1Q8CDD9 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Lrif1Q8CDD9 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Lrif1Q8CDD9 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lrif1Q8CDD9 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Lrif1Q8CDD9 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lrif1Q8CDD9 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lrif1Q8CDD9 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Lrif1Q8CDD9 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lrif1Q8CDD9 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
Lrif1Q8CDD9 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lrif1Q8CDD9 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.44□□□□□ -0.1
Lrif1Q8CDD9 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lrif1Q8CDD9 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Lrif1Q8CDD9 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lrif1Q8CDD9 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lrif1Q8CDD9 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Lrif1Q8CDD9 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Lrif1Q8CDD9 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.44□□□□□ -0.1
Lrif1Q8CDD9 Gm7222-201ENSMUST00000117512 906 ntBASIC14.44□□□□□ -0.1
Lrif1Q8CDD9 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC14.44□□□□□ -0.1
Lrif1Q8CDD9 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC14.44□□□□□ -0.1
Lrif1Q8CDD9 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lrif1Q8CDD9 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
Lrif1Q8CDD9 Gm18206-201ENSMUST00000207027 926 ntBASIC14.44□□□□□ -0.1
Lrif1Q8CDD9 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lrif1Q8CDD9 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lrif1Q8CDD9 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lrif1Q8CDD9 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Lrif1Q8CDD9 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Lrif1Q8CDD9 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lrif1Q8CDD9 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Lrif1Q8CDD9 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Lrif1Q8CDD9 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lrif1Q8CDD9 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lrif1Q8CDD9 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lrif1Q8CDD9 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lrif1Q8CDD9 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lrif1Q8CDD9 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lrif1Q8CDD9 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lrif1Q8CDD9 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Lrif1Q8CDD9 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Lrif1Q8CDD9 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lrif1Q8CDD9 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Lrif1Q8CDD9 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lrif1Q8CDD9 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lrif1Q8CDD9 Gm42769-201ENSMUST00000198576 1659 ntBASIC14.43□□□□□ -0.1
Lrif1Q8CDD9 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Lrif1Q8CDD9 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Lrif1Q8CDD9 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Lrif1Q8CDD9 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC14.43□□□□□ -0.1
Lrif1Q8CDD9 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC14.43□□□□□ -0.1
Lrif1Q8CDD9 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC14.43□□□□□ -0.1
Lrif1Q8CDD9 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC14.43□□□□□ -0.1
Lrif1Q8CDD9 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
Lrif1Q8CDD9 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lrif1Q8CDD9 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lrif1Q8CDD9 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lrif1Q8CDD9 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lrif1Q8CDD9 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lrif1Q8CDD9 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Lrif1Q8CDD9 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lrif1Q8CDD9 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lrif1Q8CDD9 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
Lrif1Q8CDD9 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lrif1Q8CDD9 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Lrif1Q8CDD9 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms