Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
Shisa4Q8CA71 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Shisa4Q8CA71 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shisa4Q8CA71 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Shisa4Q8CA71 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shisa4Q8CA71 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Shisa4Q8CA71 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC16.91■□□□□ 0.3
Shisa4Q8CA71 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shisa4Q8CA71 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Shisa4Q8CA71 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shisa4Q8CA71 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Shisa4Q8CA71 BC001981-202ENSMUST00000191393 1545 ntBASIC16.91■□□□□ 0.3
Shisa4Q8CA71 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shisa4Q8CA71 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Shisa4Q8CA71 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shisa4Q8CA71 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Shisa4Q8CA71 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shisa4Q8CA71 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Shisa4Q8CA71 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Shisa4Q8CA71 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shisa4Q8CA71 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shisa4Q8CA71 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shisa4Q8CA71 Gm6222-201ENSMUST00000120787 396 ntBASIC16.9■□□□□ 0.3
Shisa4Q8CA71 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Shisa4Q8CA71 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC16.9■□□□□ 0.3
Shisa4Q8CA71 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Shisa4Q8CA71 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Shisa4Q8CA71 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC16.9■□□□□ 0.3
Shisa4Q8CA71 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shisa4Q8CA71 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Shisa4Q8CA71 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Shisa4Q8CA71 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shisa4Q8CA71 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Shisa4Q8CA71 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Shisa4Q8CA71 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Shisa4Q8CA71 Gm10676-201ENSMUST00000098778 3221 ntBASIC16.89■□□□□ 0.29
Shisa4Q8CA71 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Shisa4Q8CA71 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC16.89■□□□□ 0.29
Shisa4Q8CA71 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Shisa4Q8CA71 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Shisa4Q8CA71 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Shisa4Q8CA71 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
Shisa4Q8CA71 Gm27622-201ENSMUST00000183779 60 ntBASIC16.89■□□□□ 0.29
Shisa4Q8CA71 AC102291.3-201ENSMUST00000226566 405 ntBASIC16.89■□□□□ 0.29
Shisa4Q8CA71 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Shisa4Q8CA71 Sybu-209ENSMUST00000228639 4113 ntBASIC16.89■□□□□ 0.29
Shisa4Q8CA71 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Shisa4Q8CA71 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Shisa4Q8CA71 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Shisa4Q8CA71 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Shisa4Q8CA71 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Shisa4Q8CA71 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Shisa4Q8CA71 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Shisa4Q8CA71 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Shisa4Q8CA71 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
Shisa4Q8CA71 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Shisa4Q8CA71 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Shisa4Q8CA71 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC16.88■□□□□ 0.29
Shisa4Q8CA71 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Shisa4Q8CA71 H2-Pa-201ENSMUST00000182803 626 ntBASIC16.88■□□□□ 0.29
Shisa4Q8CA71 Gm45453-201ENSMUST00000211758 853 ntBASIC16.88■□□□□ 0.29
Shisa4Q8CA71 Dupd1-202ENSMUST00000224735 548 ntBASIC16.88■□□□□ 0.29
Shisa4Q8CA71 Shd-206ENSMUST00000225145 998 ntBASIC16.88■□□□□ 0.29
Shisa4Q8CA71 AC126408.1-201ENSMUST00000225184 523 ntBASIC16.88■□□□□ 0.29
Shisa4Q8CA71 AC155729.1-201ENSMUST00000227758 544 ntBASIC16.88■□□□□ 0.29
Shisa4Q8CA71 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Shisa4Q8CA71 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Shisa4Q8CA71 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC16.88■□□□□ 0.29
Shisa4Q8CA71 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC16.88■□□□□ 0.29
Shisa4Q8CA71 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Shisa4Q8CA71 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Shisa4Q8CA71 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Shisa4Q8CA71 Ssr1-204ENSMUST00000225319 1610 ntBASIC16.88■□□□□ 0.29
Shisa4Q8CA71 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Shisa4Q8CA71 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Shisa4Q8CA71 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Shisa4Q8CA71 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Shisa4Q8CA71 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Shisa4Q8CA71 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Shisa4Q8CA71 Gm13517-201ENSMUST00000120782 1495 ntBASIC16.87■□□□□ 0.29
Shisa4Q8CA71 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC16.87■□□□□ 0.29
Shisa4Q8CA71 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Shisa4Q8CA71 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Shisa4Q8CA71 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Shisa4Q8CA71 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Shisa4Q8CA71 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Shisa4Q8CA71 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Shisa4Q8CA71 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Shisa4Q8CA71 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Shisa4Q8CA71 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Shisa4Q8CA71 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC16.87■□□□□ 0.29
Shisa4Q8CA71 AC125206.2-201ENSMUST00000217454 574 ntBASIC16.87■□□□□ 0.29
Shisa4Q8CA71 Gm16476-201ENSMUST00000221544 139 ntBASIC16.87■□□□□ 0.29
Shisa4Q8CA71 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC16.87■□□□□ 0.29
Shisa4Q8CA71 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Shisa4Q8CA71 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Shisa4Q8CA71 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Shisa4Q8CA71 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Shisa4Q8CA71 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Shisa4Q8CA71 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms