Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rft1Q8C3B8 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rft1Q8C3B8 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rft1Q8C3B8 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rft1Q8C3B8 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Rft1Q8C3B8 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rft1Q8C3B8 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rft1Q8C3B8 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rft1Q8C3B8 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rft1Q8C3B8 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
Rft1Q8C3B8 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rft1Q8C3B8 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Rft1Q8C3B8 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rft1Q8C3B8 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rft1Q8C3B8 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Rft1Q8C3B8 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rft1Q8C3B8 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rft1Q8C3B8 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Rft1Q8C3B8 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rft1Q8C3B8 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rft1Q8C3B8 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rft1Q8C3B8 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rft1Q8C3B8 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rft1Q8C3B8 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rft1Q8C3B8 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rft1Q8C3B8 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rft1Q8C3B8 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Rft1Q8C3B8 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rft1Q8C3B8 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rft1Q8C3B8 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC13.05□□□□□ -0.32
Rft1Q8C3B8 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC13.05□□□□□ -0.32
Rft1Q8C3B8 Gm15358-201ENSMUST00000119249 520 ntBASIC13.05□□□□□ -0.32
Rft1Q8C3B8 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rft1Q8C3B8 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC13.05□□□□□ -0.32
Rft1Q8C3B8 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rft1Q8C3B8 Mir5126-201ENSMUST00000175513 77 ntBASIC13.05□□□□□ -0.32
Rft1Q8C3B8 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC13.05□□□□□ -0.32
Rft1Q8C3B8 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rft1Q8C3B8 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rft1Q8C3B8 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rft1Q8C3B8 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.05□□□□□ -0.32
Rft1Q8C3B8 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rft1Q8C3B8 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rft1Q8C3B8 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.05□□□□□ -0.32
Rft1Q8C3B8 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rft1Q8C3B8 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rft1Q8C3B8 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rft1Q8C3B8 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rft1Q8C3B8 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Rft1Q8C3B8 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rft1Q8C3B8 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rft1Q8C3B8 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rft1Q8C3B8 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC13.04□□□□□ -0.32
Rft1Q8C3B8 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rft1Q8C3B8 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC13.04□□□□□ -0.32
Rft1Q8C3B8 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rft1Q8C3B8 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rft1Q8C3B8 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.04□□□□□ -0.32
Rft1Q8C3B8 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rft1Q8C3B8 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rft1Q8C3B8 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Rft1Q8C3B8 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rft1Q8C3B8 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rft1Q8C3B8 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rft1Q8C3B8 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rft1Q8C3B8 AC093926.2-201ENSMUST00000214468 1228 ntBASIC13.04□□□□□ -0.32
Rft1Q8C3B8 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rft1Q8C3B8 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rft1Q8C3B8 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rft1Q8C3B8 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rft1Q8C3B8 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rft1Q8C3B8 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rft1Q8C3B8 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rft1Q8C3B8 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rft1Q8C3B8 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rft1Q8C3B8 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rft1Q8C3B8 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rft1Q8C3B8 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Rft1Q8C3B8 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rft1Q8C3B8 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rft1Q8C3B8 Gm5049-201ENSMUST00000195878 1590 ntBASIC13.03□□□□□ -0.32
Rft1Q8C3B8 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rft1Q8C3B8 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rft1Q8C3B8 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.03□□□□□ -0.32
Rft1Q8C3B8 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rft1Q8C3B8 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rft1Q8C3B8 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rft1Q8C3B8 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rft1Q8C3B8 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rft1Q8C3B8 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC13.03□□□□□ -0.32
Rft1Q8C3B8 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC13.03□□□□□ -0.32
Rft1Q8C3B8 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rft1Q8C3B8 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC13.03□□□□□ -0.32
Rft1Q8C3B8 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rft1Q8C3B8 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC13.03□□□□□ -0.32
Rft1Q8C3B8 Gm15590-201ENSMUST00000078419 552 ntBASIC13.03□□□□□ -0.32
Rft1Q8C3B8 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rft1Q8C3B8 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rft1Q8C3B8 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rft1Q8C3B8 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms