Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Sh3rf3Q8C120 Gm6226-201ENSMUST00000117765 1146 ntBASIC15.23■□□□□ 0.03
Sh3rf3Q8C120 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Sh3rf3Q8C120 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sh3rf3Q8C120 Gm5264-201ENSMUST00000190584 848 ntBASIC15.23■□□□□ 0.03
Sh3rf3Q8C120 Gm20553-201ENSMUST00000204205 844 ntBASIC15.23■□□□□ 0.03
Sh3rf3Q8C120 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC15.23■□□□□ 0.03
Sh3rf3Q8C120 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sh3rf3Q8C120 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sh3rf3Q8C120 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Sh3rf3Q8C120 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sh3rf3Q8C120 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sh3rf3Q8C120 Gm13410-201ENSMUST00000117058 1415 ntBASIC15.23■□□□□ 0.03
Sh3rf3Q8C120 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sh3rf3Q8C120 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sh3rf3Q8C120 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
Sh3rf3Q8C120 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC15.23■□□□□ 0.03
Sh3rf3Q8C120 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Sh3rf3Q8C120 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sh3rf3Q8C120 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC15.23■□□□□ 0.03
Sh3rf3Q8C120 Gm45605-201ENSMUST00000210265 4269 ntBASIC15.23■□□□□ 0.03
Sh3rf3Q8C120 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sh3rf3Q8C120 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sh3rf3Q8C120 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sh3rf3Q8C120 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sh3rf3Q8C120 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sh3rf3Q8C120 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sh3rf3Q8C120 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sh3rf3Q8C120 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
Sh3rf3Q8C120 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sh3rf3Q8C120 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC15.22■□□□□ 0.03
Sh3rf3Q8C120 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sh3rf3Q8C120 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sh3rf3Q8C120 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Sh3rf3Q8C120 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sh3rf3Q8C120 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Sh3rf3Q8C120 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC15.22■□□□□ 0.03
Sh3rf3Q8C120 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC15.22■□□□□ 0.03
Sh3rf3Q8C120 Gm15483-201ENSMUST00000120338 456 ntBASIC15.22■□□□□ 0.03
Sh3rf3Q8C120 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Sh3rf3Q8C120 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Sh3rf3Q8C120 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sh3rf3Q8C120 Mir8117-201ENSMUST00000184773 107 ntBASIC15.22■□□□□ 0.03
Sh3rf3Q8C120 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Sh3rf3Q8C120 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sh3rf3Q8C120 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Sh3rf3Q8C120 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Sh3rf3Q8C120 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sh3rf3Q8C120 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sh3rf3Q8C120 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sh3rf3Q8C120 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sh3rf3Q8C120 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sh3rf3Q8C120 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Sh3rf3Q8C120 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sh3rf3Q8C120 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sh3rf3Q8C120 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Sh3rf3Q8C120 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Sh3rf3Q8C120 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
Sh3rf3Q8C120 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Sh3rf3Q8C120 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sh3rf3Q8C120 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Sh3rf3Q8C120 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sh3rf3Q8C120 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Sh3rf3Q8C120 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sh3rf3Q8C120 Gm8749-201ENSMUST00000117737 331 ntBASIC15.21■□□□□ 0.03
Sh3rf3Q8C120 H2af-ps-201ENSMUST00000119066 295 ntBASIC15.21■□□□□ 0.03
Sh3rf3Q8C120 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC15.21■□□□□ 0.03
Sh3rf3Q8C120 Rpph1-201ENSMUST00000175096 319 ntBASIC15.21■□□□□ 0.03
Sh3rf3Q8C120 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC15.21■□□□□ 0.03
Sh3rf3Q8C120 Gm5712-201ENSMUST00000199748 1043 ntBASIC15.21■□□□□ 0.03
Sh3rf3Q8C120 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC15.21■□□□□ 0.03
Sh3rf3Q8C120 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sh3rf3Q8C120 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Sh3rf3Q8C120 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Sh3rf3Q8C120 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Sh3rf3Q8C120 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sh3rf3Q8C120 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Sh3rf3Q8C120 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sh3rf3Q8C120 Gm38391-201ENSMUST00000191720 4069 ntBASIC15.21■□□□□ 0.03
Sh3rf3Q8C120 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Sh3rf3Q8C120 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Sh3rf3Q8C120 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sh3rf3Q8C120 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Sh3rf3Q8C120 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Sh3rf3Q8C120 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
Sh3rf3Q8C120 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Sh3rf3Q8C120 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Sh3rf3Q8C120 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Sh3rf3Q8C120 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Sh3rf3Q8C120 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sh3rf3Q8C120 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sh3rf3Q8C120 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sh3rf3Q8C120 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sh3rf3Q8C120 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sh3rf3Q8C120 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sh3rf3Q8C120 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sh3rf3Q8C120 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sh3rf3Q8C120 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
Sh3rf3Q8C120 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sh3rf3Q8C120 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms