Protein–RNA interactions for Protein: Q8C0Y0

Ppp4r4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, mousemouse

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp4r4Q8C0Y0 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ppp4r4Q8C0Y0 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Ppp4r4Q8C0Y0 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC14.8□□□□□ -0.04
Ppp4r4Q8C0Y0 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ppp4r4Q8C0Y0 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ppp4r4Q8C0Y0 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ppp4r4Q8C0Y0 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ppp4r4Q8C0Y0 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ppp4r4Q8C0Y0 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ppp4r4Q8C0Y0 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ppp4r4Q8C0Y0 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ppp4r4Q8C0Y0 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ppp4r4Q8C0Y0 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ppp4r4Q8C0Y0 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ppp4r4Q8C0Y0 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ppp4r4Q8C0Y0 Gm16198-201ENSMUST00000118766 670 ntBASIC14.79□□□□□ -0.04
Ppp4r4Q8C0Y0 Gm5648-201ENSMUST00000122244 1587 ntBASIC14.79□□□□□ -0.04
Ppp4r4Q8C0Y0 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Ppp4r4Q8C0Y0 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ppp4r4Q8C0Y0 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.79□□□□□ -0.04
Ppp4r4Q8C0Y0 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC14.79□□□□□ -0.04
Ppp4r4Q8C0Y0 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC14.79□□□□□ -0.04
Ppp4r4Q8C0Y0 Gm27301-201ENSMUST00000184012 127 ntBASIC14.79□□□□□ -0.04
Ppp4r4Q8C0Y0 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC14.79□□□□□ -0.04
Ppp4r4Q8C0Y0 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ppp4r4Q8C0Y0 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ppp4r4Q8C0Y0 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ppp4r4Q8C0Y0 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.79□□□□□ -0.04
Ppp4r4Q8C0Y0 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.79□□□□□ -0.04
Ppp4r4Q8C0Y0 AC159295.1-201ENSMUST00000225326 940 ntBASIC14.79□□□□□ -0.04
Ppp4r4Q8C0Y0 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ppp4r4Q8C0Y0 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ppp4r4Q8C0Y0 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ppp4r4Q8C0Y0 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ppp4r4Q8C0Y0 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ppp4r4Q8C0Y0 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ppp4r4Q8C0Y0 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Ppp4r4Q8C0Y0 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ppp4r4Q8C0Y0 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Ppp4r4Q8C0Y0 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ppp4r4Q8C0Y0 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ppp4r4Q8C0Y0 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Ppp4r4Q8C0Y0 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ppp4r4Q8C0Y0 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ppp4r4Q8C0Y0 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ppp4r4Q8C0Y0 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
Ppp4r4Q8C0Y0 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Ppp4r4Q8C0Y0 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ppp4r4Q8C0Y0 Gm13410-201ENSMUST00000117058 1415 ntBASIC14.78□□□□□ -0.04
Ppp4r4Q8C0Y0 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ppp4r4Q8C0Y0 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ppp4r4Q8C0Y0 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC14.78□□□□□ -0.04
Ppp4r4Q8C0Y0 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ppp4r4Q8C0Y0 Gm27397-201ENSMUST00000184997 107 ntBASIC14.78□□□□□ -0.04
Ppp4r4Q8C0Y0 Gm43767-201ENSMUST00000198933 381 ntBASIC14.78□□□□□ -0.04
Ppp4r4Q8C0Y0 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ppp4r4Q8C0Y0 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ppp4r4Q8C0Y0 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ppp4r4Q8C0Y0 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ppp4r4Q8C0Y0 Efs-202ENSMUST00000227037 2540 ntBASIC14.78□□□□□ -0.04
Ppp4r4Q8C0Y0 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ppp4r4Q8C0Y0 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.78□□□□□ -0.04
Ppp4r4Q8C0Y0 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ppp4r4Q8C0Y0 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.78□□□□□ -0.04
Ppp4r4Q8C0Y0 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ppp4r4Q8C0Y0 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ppp4r4Q8C0Y0 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ppp4r4Q8C0Y0 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.78□□□□□ -0.04
Ppp4r4Q8C0Y0 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Ppp4r4Q8C0Y0 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ppp4r4Q8C0Y0 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ppp4r4Q8C0Y0 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Ppp4r4Q8C0Y0 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ppp4r4Q8C0Y0 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ppp4r4Q8C0Y0 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ppp4r4Q8C0Y0 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ppp4r4Q8C0Y0 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.04
Ppp4r4Q8C0Y0 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.77□□□□□ -0.04
Ppp4r4Q8C0Y0 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ppp4r4Q8C0Y0 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Ppp4r4Q8C0Y0 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.04
Ppp4r4Q8C0Y0 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Ppp4r4Q8C0Y0 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ppp4r4Q8C0Y0 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ppp4r4Q8C0Y0 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ppp4r4Q8C0Y0 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ppp4r4Q8C0Y0 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Ppp4r4Q8C0Y0 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ppp4r4Q8C0Y0 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ppp4r4Q8C0Y0 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Ppp4r4Q8C0Y0 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ppp4r4Q8C0Y0 Gm9385-201ENSMUST00000117563 472 ntBASIC14.77□□□□□ -0.05
Ppp4r4Q8C0Y0 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.77□□□□□ -0.05
Ppp4r4Q8C0Y0 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC14.77□□□□□ -0.05
Ppp4r4Q8C0Y0 Gm37935-201ENSMUST00000192012 982 ntBASIC14.77□□□□□ -0.05
Ppp4r4Q8C0Y0 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ppp4r4Q8C0Y0 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ppp4r4Q8C0Y0 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Ppp4r4Q8C0Y0 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ppp4r4Q8C0Y0 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 73 ms