Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sh3rf2Q8BZT2 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sh3rf2Q8BZT2 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sh3rf2Q8BZT2 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sh3rf2Q8BZT2 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Sh3rf2Q8BZT2 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sh3rf2Q8BZT2 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sh3rf2Q8BZT2 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sh3rf2Q8BZT2 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sh3rf2Q8BZT2 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Sh3rf2Q8BZT2 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sh3rf2Q8BZT2 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sh3rf2Q8BZT2 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sh3rf2Q8BZT2 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sh3rf2Q8BZT2 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.79□□□□□ -0.04
Sh3rf2Q8BZT2 Gm27631-201ENSMUST00000184163 466 ntBASIC14.79□□□□□ -0.04
Sh3rf2Q8BZT2 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Sh3rf2Q8BZT2 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC14.79□□□□□ -0.04
Sh3rf2Q8BZT2 AC149588.3-201ENSMUST00000227515 150 ntBASIC14.79□□□□□ -0.04
Sh3rf2Q8BZT2 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sh3rf2Q8BZT2 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sh3rf2Q8BZT2 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sh3rf2Q8BZT2 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sh3rf2Q8BZT2 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sh3rf2Q8BZT2 Gm2423-201ENSMUST00000074863 733 ntBASIC14.79□□□□□ -0.04
Sh3rf2Q8BZT2 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Sh3rf2Q8BZT2 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sh3rf2Q8BZT2 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Sh3rf2Q8BZT2 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sh3rf2Q8BZT2 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sh3rf2Q8BZT2 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sh3rf2Q8BZT2 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.78□□□□□ -0.04
Sh3rf2Q8BZT2 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Sh3rf2Q8BZT2 Gm5320-201ENSMUST00000207163 1519 ntBASIC14.78□□□□□ -0.04
Sh3rf2Q8BZT2 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sh3rf2Q8BZT2 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sh3rf2Q8BZT2 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sh3rf2Q8BZT2 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Sh3rf2Q8BZT2 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Sh3rf2Q8BZT2 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sh3rf2Q8BZT2 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sh3rf2Q8BZT2 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sh3rf2Q8BZT2 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sh3rf2Q8BZT2 Gm16476-201ENSMUST00000221544 139 ntBASIC14.78□□□□□ -0.04
Sh3rf2Q8BZT2 Dupd1-202ENSMUST00000224735 548 ntBASIC14.78□□□□□ -0.04
Sh3rf2Q8BZT2 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Sh3rf2Q8BZT2 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Sh3rf2Q8BZT2 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sh3rf2Q8BZT2 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sh3rf2Q8BZT2 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sh3rf2Q8BZT2 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Sh3rf2Q8BZT2 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sh3rf2Q8BZT2 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sh3rf2Q8BZT2 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sh3rf2Q8BZT2 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sh3rf2Q8BZT2 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sh3rf2Q8BZT2 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sh3rf2Q8BZT2 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sh3rf2Q8BZT2 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Sh3rf2Q8BZT2 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sh3rf2Q8BZT2 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sh3rf2Q8BZT2 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sh3rf2Q8BZT2 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sh3rf2Q8BZT2 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sh3rf2Q8BZT2 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sh3rf2Q8BZT2 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC14.77□□□□□ -0.05
Sh3rf2Q8BZT2 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC14.77□□□□□ -0.05
Sh3rf2Q8BZT2 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC14.77□□□□□ -0.05
Sh3rf2Q8BZT2 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC14.77□□□□□ -0.05
Sh3rf2Q8BZT2 Gm14719-201ENSMUST00000121891 340 ntBASIC14.77□□□□□ -0.05
Sh3rf2Q8BZT2 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
Sh3rf2Q8BZT2 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sh3rf2Q8BZT2 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sh3rf2Q8BZT2 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Sh3rf2Q8BZT2 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC14.77□□□□□ -0.05
Sh3rf2Q8BZT2 Gm46209-201ENSMUST00000217912 553 ntBASIC14.77□□□□□ -0.05
Sh3rf2Q8BZT2 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC14.77□□□□□ -0.05
Sh3rf2Q8BZT2 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sh3rf2Q8BZT2 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Sh3rf2Q8BZT2 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sh3rf2Q8BZT2 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sh3rf2Q8BZT2 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Sh3rf2Q8BZT2 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sh3rf2Q8BZT2 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.05
Sh3rf2Q8BZT2 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sh3rf2Q8BZT2 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Sh3rf2Q8BZT2 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sh3rf2Q8BZT2 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sh3rf2Q8BZT2 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Sh3rf2Q8BZT2 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sh3rf2Q8BZT2 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Sh3rf2Q8BZT2 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sh3rf2Q8BZT2 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.77□□□□□ -0.05
Sh3rf2Q8BZT2 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Sh3rf2Q8BZT2 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Sh3rf2Q8BZT2 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sh3rf2Q8BZT2 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Sh3rf2Q8BZT2 Gm4204-201ENSMUST00000110798 1231 ntBASIC14.76□□□□□ -0.05
Sh3rf2Q8BZT2 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC14.76□□□□□ -0.05
Sh3rf2Q8BZT2 Gm23547-201ENSMUST00000158210 271 ntBASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms