Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Usp43Q8BUM9 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Usp43Q8BUM9 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Usp43Q8BUM9 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Usp43Q8BUM9 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Usp43Q8BUM9 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Usp43Q8BUM9 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Usp43Q8BUM9 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC14.79□□□□□ -0.04
Usp43Q8BUM9 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.79□□□□□ -0.04
Usp43Q8BUM9 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Usp43Q8BUM9 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.79□□□□□ -0.04
Usp43Q8BUM9 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Usp43Q8BUM9 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Usp43Q8BUM9 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC14.79□□□□□ -0.04
Usp43Q8BUM9 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC14.79□□□□□ -0.04
Usp43Q8BUM9 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Usp43Q8BUM9 Nrn1-204ENSMUST00000224323 1779 ntBASIC14.79□□□□□ -0.04
Usp43Q8BUM9 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Usp43Q8BUM9 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Usp43Q8BUM9 Gm15500-202ENSMUST00000071641 1019 ntBASIC14.79□□□□□ -0.04
Usp43Q8BUM9 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Usp43Q8BUM9 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Usp43Q8BUM9 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Usp43Q8BUM9 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Usp43Q8BUM9 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.79□□□□□ -0.04
Usp43Q8BUM9 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Usp43Q8BUM9 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Usp43Q8BUM9 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.78□□□□□ -0.04
Usp43Q8BUM9 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Usp43Q8BUM9 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Usp43Q8BUM9 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Usp43Q8BUM9 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Usp43Q8BUM9 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.78□□□□□ -0.04
Usp43Q8BUM9 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Usp43Q8BUM9 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Usp43Q8BUM9 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Usp43Q8BUM9 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Usp43Q8BUM9 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Usp43Q8BUM9 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Usp43Q8BUM9 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Usp43Q8BUM9 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Usp43Q8BUM9 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Usp43Q8BUM9 Gm14042-201ENSMUST00000120139 833 ntBASIC14.78□□□□□ -0.04
Usp43Q8BUM9 Gm11543-201ENSMUST00000120758 370 ntBASIC14.78□□□□□ -0.04
Usp43Q8BUM9 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC14.78□□□□□ -0.04
Usp43Q8BUM9 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Usp43Q8BUM9 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Usp43Q8BUM9 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.78□□□□□ -0.04
Usp43Q8BUM9 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.78□□□□□ -0.04
Usp43Q8BUM9 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Usp43Q8BUM9 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.78□□□□□ -0.04
Usp43Q8BUM9 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Usp43Q8BUM9 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Usp43Q8BUM9 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Usp43Q8BUM9 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Usp43Q8BUM9 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.78□□□□□ -0.04
Usp43Q8BUM9 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Usp43Q8BUM9 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Usp43Q8BUM9 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC14.78□□□□□ -0.04
Usp43Q8BUM9 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Usp43Q8BUM9 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Usp43Q8BUM9 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Usp43Q8BUM9 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Usp43Q8BUM9 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Usp43Q8BUM9 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Usp43Q8BUM9 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Usp43Q8BUM9 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Usp43Q8BUM9 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Usp43Q8BUM9 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Usp43Q8BUM9 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Usp43Q8BUM9 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Usp43Q8BUM9 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Usp43Q8BUM9 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Usp43Q8BUM9 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Usp43Q8BUM9 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Usp43Q8BUM9 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
Usp43Q8BUM9 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Usp43Q8BUM9 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC14.77□□□□□ -0.04
Usp43Q8BUM9 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Usp43Q8BUM9 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Usp43Q8BUM9 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Usp43Q8BUM9 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.77□□□□□ -0.04
Usp43Q8BUM9 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC14.77□□□□□ -0.05
Usp43Q8BUM9 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Usp43Q8BUM9 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Usp43Q8BUM9 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC14.77□□□□□ -0.05
Usp43Q8BUM9 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC14.77□□□□□ -0.05
Usp43Q8BUM9 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
Usp43Q8BUM9 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
Usp43Q8BUM9 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Usp43Q8BUM9 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Usp43Q8BUM9 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC14.77□□□□□ -0.05
Usp43Q8BUM9 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.77□□□□□ -0.05
Usp43Q8BUM9 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Usp43Q8BUM9 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Usp43Q8BUM9 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Usp43Q8BUM9 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Usp43Q8BUM9 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Usp43Q8BUM9 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Usp43Q8BUM9 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms