Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Nup54Q8BTS4 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nup54Q8BTS4 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nup54Q8BTS4 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Nup54Q8BTS4 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nup54Q8BTS4 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nup54Q8BTS4 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Nup54Q8BTS4 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC14.94□□□□□ -0.02
Nup54Q8BTS4 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Nup54Q8BTS4 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Nup54Q8BTS4 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nup54Q8BTS4 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nup54Q8BTS4 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nup54Q8BTS4 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC14.94□□□□□ -0.02
Nup54Q8BTS4 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Nup54Q8BTS4 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
Nup54Q8BTS4 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nup54Q8BTS4 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Nup54Q8BTS4 Gm18766-201ENSMUST00000189811 808 ntBASIC14.94□□□□□ -0.02
Nup54Q8BTS4 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Nup54Q8BTS4 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nup54Q8BTS4 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nup54Q8BTS4 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nup54Q8BTS4 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nup54Q8BTS4 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.94□□□□□ -0.02
Nup54Q8BTS4 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nup54Q8BTS4 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nup54Q8BTS4 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Nup54Q8BTS4 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nup54Q8BTS4 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nup54Q8BTS4 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nup54Q8BTS4 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nup54Q8BTS4 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nup54Q8BTS4 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Nup54Q8BTS4 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nup54Q8BTS4 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nup54Q8BTS4 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nup54Q8BTS4 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nup54Q8BTS4 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nup54Q8BTS4 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.93□□□□□ -0.02
Nup54Q8BTS4 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Nup54Q8BTS4 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Nup54Q8BTS4 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nup54Q8BTS4 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nup54Q8BTS4 Gm6415-201ENSMUST00000118488 348 ntBASIC14.93□□□□□ -0.02
Nup54Q8BTS4 Gm13823-201ENSMUST00000119930 345 ntBASIC14.93□□□□□ -0.02
Nup54Q8BTS4 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Nup54Q8BTS4 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC14.93□□□□□ -0.02
Nup54Q8BTS4 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC14.93□□□□□ -0.02
Nup54Q8BTS4 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Nup54Q8BTS4 Gm27430-201ENSMUST00000184585 107 ntBASIC14.93□□□□□ -0.02
Nup54Q8BTS4 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC14.93□□□□□ -0.02
Nup54Q8BTS4 Gm44333-201ENSMUST00000197168 107 ntBASIC14.93□□□□□ -0.02
Nup54Q8BTS4 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Nup54Q8BTS4 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Nup54Q8BTS4 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nup54Q8BTS4 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nup54Q8BTS4 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nup54Q8BTS4 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
Nup54Q8BTS4 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Nup54Q8BTS4 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nup54Q8BTS4 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Nup54Q8BTS4 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
Nup54Q8BTS4 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Nup54Q8BTS4 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Nup54Q8BTS4 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Nup54Q8BTS4 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nup54Q8BTS4 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nup54Q8BTS4 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nup54Q8BTS4 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Nup54Q8BTS4 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Nup54Q8BTS4 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nup54Q8BTS4 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nup54Q8BTS4 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Nup54Q8BTS4 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Nup54Q8BTS4 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Nup54Q8BTS4 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nup54Q8BTS4 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
Nup54Q8BTS4 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nup54Q8BTS4 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Nup54Q8BTS4 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
Nup54Q8BTS4 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Nup54Q8BTS4 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Nup54Q8BTS4 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC14.92□□□□□ -0.02
Nup54Q8BTS4 Gm22175-201ENSMUST00000175007 78 ntBASIC14.92□□□□□ -0.02
Nup54Q8BTS4 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC14.92□□□□□ -0.02
Nup54Q8BTS4 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Nup54Q8BTS4 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Nup54Q8BTS4 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nup54Q8BTS4 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Nup54Q8BTS4 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
Nup54Q8BTS4 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nup54Q8BTS4 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Nup54Q8BTS4 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Nup54Q8BTS4 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Nup54Q8BTS4 AC154767.3-201ENSMUST00000225150 1342 ntBASIC14.92□□□□□ -0.02
Nup54Q8BTS4 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nup54Q8BTS4 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Nup54Q8BTS4 Gm13517-201ENSMUST00000120782 1495 ntBASIC14.91□□□□□ -0.02
Nup54Q8BTS4 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms