Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smco3Q8BQM7 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smco3Q8BQM7 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smco3Q8BQM7 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smco3Q8BQM7 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smco3Q8BQM7 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smco3Q8BQM7 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Smco3Q8BQM7 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
Smco3Q8BQM7 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Smco3Q8BQM7 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smco3Q8BQM7 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smco3Q8BQM7 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Smco3Q8BQM7 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smco3Q8BQM7 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
Smco3Q8BQM7 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smco3Q8BQM7 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Smco3Q8BQM7 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Smco3Q8BQM7 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC12.04□□□□□ -0.48
Smco3Q8BQM7 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC12.04□□□□□ -0.48
Smco3Q8BQM7 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC12.04□□□□□ -0.48
Smco3Q8BQM7 Gm23547-201ENSMUST00000158210 271 ntBASIC12.04□□□□□ -0.48
Smco3Q8BQM7 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Smco3Q8BQM7 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Smco3Q8BQM7 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Smco3Q8BQM7 AC153881.2-201ENSMUST00000214877 204 ntBASIC12.04□□□□□ -0.48
Smco3Q8BQM7 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC12.04□□□□□ -0.48
Smco3Q8BQM7 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Smco3Q8BQM7 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Smco3Q8BQM7 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC12.04□□□□□ -0.48
Smco3Q8BQM7 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Smco3Q8BQM7 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smco3Q8BQM7 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smco3Q8BQM7 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Smco3Q8BQM7 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Smco3Q8BQM7 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.04□□□□□ -0.48
Smco3Q8BQM7 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC12.04□□□□□ -0.48
Smco3Q8BQM7 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smco3Q8BQM7 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
Smco3Q8BQM7 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smco3Q8BQM7 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smco3Q8BQM7 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smco3Q8BQM7 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smco3Q8BQM7 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smco3Q8BQM7 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smco3Q8BQM7 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smco3Q8BQM7 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smco3Q8BQM7 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Smco3Q8BQM7 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smco3Q8BQM7 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smco3Q8BQM7 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Smco3Q8BQM7 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smco3Q8BQM7 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Smco3Q8BQM7 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Smco3Q8BQM7 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smco3Q8BQM7 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Smco3Q8BQM7 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Smco3Q8BQM7 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Smco3Q8BQM7 Celf4-206ENSMUST00000224553 1729 ntBASIC12.03□□□□□ -0.48
Smco3Q8BQM7 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Smco3Q8BQM7 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Smco3Q8BQM7 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smco3Q8BQM7 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smco3Q8BQM7 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Smco3Q8BQM7 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smco3Q8BQM7 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smco3Q8BQM7 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smco3Q8BQM7 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smco3Q8BQM7 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smco3Q8BQM7 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC12.03□□□□□ -0.48
Smco3Q8BQM7 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Smco3Q8BQM7 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smco3Q8BQM7 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smco3Q8BQM7 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Smco3Q8BQM7 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smco3Q8BQM7 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Smco3Q8BQM7 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smco3Q8BQM7 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC12.03□□□□□ -0.48
Smco3Q8BQM7 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC12.03□□□□□ -0.48
Smco3Q8BQM7 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Smco3Q8BQM7 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Smco3Q8BQM7 AC127349.1-201ENSMUST00000224590 266 ntBASIC12.03□□□□□ -0.48
Smco3Q8BQM7 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Smco3Q8BQM7 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smco3Q8BQM7 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Smco3Q8BQM7 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smco3Q8BQM7 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC12.03□□□□□ -0.48
Smco3Q8BQM7 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Smco3Q8BQM7 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smco3Q8BQM7 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Smco3Q8BQM7 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smco3Q8BQM7 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smco3Q8BQM7 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smco3Q8BQM7 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Smco3Q8BQM7 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Smco3Q8BQM7 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smco3Q8BQM7 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smco3Q8BQM7 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Smco3Q8BQM7 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Smco3Q8BQM7 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC12.02□□□□□ -0.48
Smco3Q8BQM7 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms