Protein–RNA interactions for Protein: Q8BMK4

Ckap4, Cytoskeleton-associated protein 4, mousemouse

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4Q8BMK4 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ckap4Q8BMK4 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ckap4Q8BMK4 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ckap4Q8BMK4 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Ckap4Q8BMK4 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ckap4Q8BMK4 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ckap4Q8BMK4 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
Ckap4Q8BMK4 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.85□□□□□ -0.19
Ckap4Q8BMK4 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ckap4Q8BMK4 Gm10499-201ENSMUST00000174094 934 ntBASIC13.85□□□□□ -0.19
Ckap4Q8BMK4 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC13.85□□□□□ -0.19
Ckap4Q8BMK4 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ckap4Q8BMK4 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ckap4Q8BMK4 Gm27741-201ENSMUST00000185060 237 ntBASIC13.85□□□□□ -0.19
Ckap4Q8BMK4 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC13.85□□□□□ -0.19
Ckap4Q8BMK4 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC13.85□□□□□ -0.19
Ckap4Q8BMK4 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC13.85□□□□□ -0.19
Ckap4Q8BMK4 Gm9682-201ENSMUST00000197505 556 ntBASIC13.85□□□□□ -0.19
Ckap4Q8BMK4 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ckap4Q8BMK4 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ckap4Q8BMK4 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ckap4Q8BMK4 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ckap4Q8BMK4 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Ckap4Q8BMK4 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ckap4Q8BMK4 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ckap4Q8BMK4 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ckap4Q8BMK4 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ckap4Q8BMK4 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ckap4Q8BMK4 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ckap4Q8BMK4 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ckap4Q8BMK4 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ckap4Q8BMK4 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ckap4Q8BMK4 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ckap4Q8BMK4 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ckap4Q8BMK4 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ckap4Q8BMK4 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ckap4Q8BMK4 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ckap4Q8BMK4 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ckap4Q8BMK4 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ckap4Q8BMK4 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ckap4Q8BMK4 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ckap4Q8BMK4 Celf4-206ENSMUST00000224553 1729 ntBASIC13.84□□□□□ -0.19
Ckap4Q8BMK4 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ckap4Q8BMK4 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ckap4Q8BMK4 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ckap4Q8BMK4 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ckap4Q8BMK4 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ckap4Q8BMK4 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ckap4Q8BMK4 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.84□□□□□ -0.19
Ckap4Q8BMK4 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ckap4Q8BMK4 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ckap4Q8BMK4 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC13.84□□□□□ -0.19
Ckap4Q8BMK4 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ckap4Q8BMK4 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ckap4Q8BMK4 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ckap4Q8BMK4 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ckap4Q8BMK4 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ckap4Q8BMK4 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ckap4Q8BMK4 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ckap4Q8BMK4 Gm44645-201ENSMUST00000205492 1653 ntBASIC13.84□□□□□ -0.19
Ckap4Q8BMK4 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ckap4Q8BMK4 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ckap4Q8BMK4 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ckap4Q8BMK4 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ckap4Q8BMK4 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC13.84□□□□□ -0.19
Ckap4Q8BMK4 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC13.84□□□□□ -0.19
Ckap4Q8BMK4 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ckap4Q8BMK4 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ckap4Q8BMK4 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ckap4Q8BMK4 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ckap4Q8BMK4 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
Ckap4Q8BMK4 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ckap4Q8BMK4 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ckap4Q8BMK4 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ckap4Q8BMK4 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ckap4Q8BMK4 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.19
Ckap4Q8BMK4 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
Ckap4Q8BMK4 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ckap4Q8BMK4 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ckap4Q8BMK4 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC13.83□□□□□ -0.2
Ckap4Q8BMK4 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ckap4Q8BMK4 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ckap4Q8BMK4 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ckap4Q8BMK4 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Ckap4Q8BMK4 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Ckap4Q8BMK4 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ckap4Q8BMK4 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ckap4Q8BMK4 Gm6184-201ENSMUST00000120403 1261 ntBASIC13.83□□□□□ -0.2
Ckap4Q8BMK4 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ckap4Q8BMK4 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ckap4Q8BMK4 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC13.83□□□□□ -0.2
Ckap4Q8BMK4 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Ckap4Q8BMK4 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ckap4Q8BMK4 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC13.83□□□□□ -0.2
Ckap4Q8BMK4 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC13.83□□□□□ -0.2
Ckap4Q8BMK4 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC13.83□□□□□ -0.2
Ckap4Q8BMK4 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ckap4Q8BMK4 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ckap4Q8BMK4 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ckap4Q8BMK4 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms