Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Gm42853-201ENSMUST00000201273 1387 ntBASIC18.85■□□□□ 0.61
Col16a1Q8BLX7 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col16a1Q8BLX7 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC18.85■□□□□ 0.61
Col16a1Q8BLX7 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col16a1Q8BLX7 Gm12928-201ENSMUST00000117115 573 ntBASIC18.85■□□□□ 0.61
Col16a1Q8BLX7 AC159896.2-201ENSMUST00000214753 269 ntBASIC18.85■□□□□ 0.61
Col16a1Q8BLX7 AC154319.1-201ENSMUST00000216330 312 ntBASIC18.85■□□□□ 0.61
Col16a1Q8BLX7 AL589735.1-201ENSMUST00000224353 270 ntBASIC18.85■□□□□ 0.61
Col16a1Q8BLX7 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col16a1Q8BLX7 Gm10012-201ENSMUST00000078252 192 ntBASIC18.85■□□□□ 0.61
Col16a1Q8BLX7 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col16a1Q8BLX7 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col16a1Q8BLX7 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col16a1Q8BLX7 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Col16a1Q8BLX7 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col16a1Q8BLX7 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col16a1Q8BLX7 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col16a1Q8BLX7 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col16a1Q8BLX7 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col16a1Q8BLX7 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Col16a1Q8BLX7 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Col16a1Q8BLX7 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC18.84■□□□□ 0.61
Col16a1Q8BLX7 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col16a1Q8BLX7 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
Col16a1Q8BLX7 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC18.84■□□□□ 0.61
Col16a1Q8BLX7 Trav4d-2-201ENSMUST00000120914 335 ntBASIC18.84■□□□□ 0.61
Col16a1Q8BLX7 Gm27514-201ENSMUST00000183692 110 ntBASIC18.84■□□□□ 0.61
Col16a1Q8BLX7 Gm18905-201ENSMUST00000205454 928 ntBASIC18.84■□□□□ 0.61
Col16a1Q8BLX7 Gm4971-201ENSMUST00000205991 1108 ntBASIC18.84■□□□□ 0.61
Col16a1Q8BLX7 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC18.84■□□□□ 0.61
Col16a1Q8BLX7 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC18.84■□□□□ 0.61
Col16a1Q8BLX7 AC192088.1-201ENSMUST00000227561 301 ntBASIC18.84■□□□□ 0.61
Col16a1Q8BLX7 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col16a1Q8BLX7 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Col16a1Q8BLX7 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col16a1Q8BLX7 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col16a1Q8BLX7 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Col16a1Q8BLX7 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Col16a1Q8BLX7 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Col16a1Q8BLX7 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Col16a1Q8BLX7 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Col16a1Q8BLX7 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC18.83■□□□□ 0.6
Col16a1Q8BLX7 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
Col16a1Q8BLX7 Gm42442-201ENSMUST00000197951 1133 ntBASIC18.83■□□□□ 0.6
Col16a1Q8BLX7 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Col16a1Q8BLX7 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Col16a1Q8BLX7 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Col16a1Q8BLX7 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Col16a1Q8BLX7 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Col16a1Q8BLX7 Camk2g-217ENSMUST00000226630 1937 ntBASIC18.83■□□□□ 0.6
Col16a1Q8BLX7 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Col16a1Q8BLX7 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Col16a1Q8BLX7 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
Col16a1Q8BLX7 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Col16a1Q8BLX7 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col16a1Q8BLX7 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC18.82■□□□□ 0.6
Col16a1Q8BLX7 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC18.82■□□□□ 0.6
Col16a1Q8BLX7 Gm43094-201ENSMUST00000196549 921 ntBASIC18.82■□□□□ 0.6
Col16a1Q8BLX7 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC18.82■□□□□ 0.6
Col16a1Q8BLX7 Gm44974-201ENSMUST00000206387 1279 ntBASIC18.82■□□□□ 0.6
Col16a1Q8BLX7 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC18.82■□□□□ 0.6
Col16a1Q8BLX7 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col16a1Q8BLX7 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC18.82■□□□□ 0.6
Col16a1Q8BLX7 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Col16a1Q8BLX7 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col16a1Q8BLX7 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col16a1Q8BLX7 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col16a1Q8BLX7 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col16a1Q8BLX7 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col16a1Q8BLX7 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col16a1Q8BLX7 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col16a1Q8BLX7 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col16a1Q8BLX7 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col16a1Q8BLX7 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Col16a1Q8BLX7 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col16a1Q8BLX7 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Col16a1Q8BLX7 Gm13689-201ENSMUST00000119360 685 ntBASIC18.81■□□□□ 0.6
Col16a1Q8BLX7 Gm13385-201ENSMUST00000121089 220 ntBASIC18.81■□□□□ 0.6
Col16a1Q8BLX7 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC18.81■□□□□ 0.6
Col16a1Q8BLX7 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col16a1Q8BLX7 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col16a1Q8BLX7 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col16a1Q8BLX7 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Col16a1Q8BLX7 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Col16a1Q8BLX7 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col16a1Q8BLX7 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Col16a1Q8BLX7 AC159196.2-201ENSMUST00000224082 1622 ntBASIC18.81■□□□□ 0.6
Col16a1Q8BLX7 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col16a1Q8BLX7 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Col16a1Q8BLX7 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col16a1Q8BLX7 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC18.81■□□□□ 0.6
Col16a1Q8BLX7 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col16a1Q8BLX7 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC18.8■□□□□ 0.6
Col16a1Q8BLX7 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col16a1Q8BLX7 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC18.8■□□□□ 0.6
Col16a1Q8BLX7 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC18.8■□□□□ 0.6
Col16a1Q8BLX7 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col16a1Q8BLX7 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col16a1Q8BLX7 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col16a1Q8BLX7 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms